Detailed information NTG0825515

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: SE933_RS02255
• Genome accession: NZ_CP138370
• Coordinates: 402544..403452 (-)
• Length: 302 a.a.
• NCBI ID: WP_000912095.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain SagR40
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 397544..408452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE933_RS02235 (SE933_02235)	-	398594..400372 (-)	1779	WP_001220907.1	acyltransferase family protein	-
SE933_RS02240 (SE933_02240)	-	400369..400749 (-)	381	WP_000787702.1	membrane protein	-
SE933_RS02245 (SE933_02245)	-	400756..401193 (-)	438	WP_000754818.1	low molecular weight protein-tyrosine-phosphatase	-
SE933_RS02250 (SE933_02250)	ruvB	401345..402343 (-)	999	WP_000196633.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
SE933_RS02255 (SE933_02255)	comR	402544..403452 (-)	909	WP_000912095.1	XRE family transcriptional regulator	Regulator
SE933_RS02260 (SE933_02260)	purB	403605..404903 (-)	1299	WP_000572890.1	adenylosuccinate lyase	-
SE933_RS02265 (SE933_02265)	-	404925..406316 (-)	1392	WP_001079797.1	hypothetical protein	-
SE933_RS02270 (SE933_02270)	purK	406369..407460 (-)	1092	WP_001084008.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
SE933_RS02275 (SE933_02275)	purE	407447..407935 (-)	489	WP_001182531.1	5-(carboxyamino)imidazole ribonucleotide mutase	-

Sequence

Protein

• Length: 302 a.a.
• Molecular weight: 35727.11 Da
• Isoelectric Point: 5.5329

>NTDB_id=825515 SE933_RS02255 WP_000912095.1 402544..403452(-) (comR) [Streptococcus agalactiae strain SagR40]
MLKHFGSKVRKFRESQQVTREEFCGDESELSVRQLARIEAGESVPNLSKAHYIARNLGVSLDSLTAGASLELSKKYKELK
YLILRTPTYNDTDRLDLIEKYLDEIYLNFYDDLPEDEKIAIESIQSSLDIYISKSHHFGDDLIREYMNQIKRKKIYSIND
LLIIKLWQYKITASRYDPNIFKIDTFIGTIDKLLNQVKVLSIENLFLLRDVLIYSLGILFILAEYQQIENIINTLNDILI
KTQDFQKRPIIDMFEWKYQLFYKENREVAKRKYQESTLFAQLIGDQVLVTQLKEEWKADYIE

Nucleotide

• Length: 909 bp

>NTDB_id=825515 SE933_RS02255 WP_000912095.1 402544..403452(-) (comR) [Streptococcus agalactiae strain SagR40]
ATGTTAAAACATTTTGGTAGTAAAGTAAGGAAGTTTAGGGAATCTCAACAGGTGACACGAGAAGAATTTTGTGGCGATGA
ATCAGAGTTATCGGTCCGACAGCTGGCTCGGATTGAAGCAGGAGAATCTGTTCCAAATTTATCTAAGGCGCATTATATCG
CTAGAAATCTAGGAGTTAGTTTAGATTCCTTAACAGCAGGAGCGAGTTTAGAACTGTCAAAAAAATATAAGGAATTAAAG
TATCTTATATTAAGGACGCCTACCTACAATGATACAGATAGACTTGATTTGATTGAAAAATATCTAGATGAGATTTATTT
AAATTTCTATGATGATTTACCTGAAGATGAAAAAATAGCAATTGAGTCCATACAAAGTTCTTTAGATATTTATATTTCTA
AAAGCCATCATTTTGGAGATGACCTGATTAGGGAATACATGAATCAAATTAAACGAAAAAAGATTTACTCTATCAATGAC
TTACTTATAATTAAACTATGGCAATATAAGATTACTGCTAGCAGGTATGATCCCAATATTTTTAAAATAGATACATTTAT
TGGTACTATAGATAAGTTGCTTAATCAAGTAAAGGTATTATCAATTGAAAACCTGTTTTTATTAAGGGATGTCCTCATTT
ATTCGTTAGGTATATTGTTTATATTAGCTGAATATCAGCAAATAGAAAATATAATAAATACTCTAAATGATATTTTAATA
AAAACTCAGGATTTTCAAAAGAGGCCAATAATAGATATGTTCGAATGGAAATATCAGTTGTTTTATAAAGAAAATAGGGA
AGTGGCTAAAAGAAAGTATCAGGAATCAACTCTTTTTGCTCAATTAATTGGCGATCAAGTTTTAGTTACACAGCTAAAAG
AGGAATGGAAAGCAGACTATATAGAATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (74-296)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	45.151	99.007	0.447
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	45.296	95.033	0.43
comR	Streptococcus pyogenes MGAS315	43.478	99.007	0.43
comR	Streptococcus pyogenes MGAS8232	41.914	100	0.421
comR	Streptococcus suis P1/7	42.424	98.344	0.417
comR	Streptococcus suis 05ZYH33	42.424	98.344	0.417
comR	Streptococcus suis D9	38.384	98.344	0.377