Detailed information NTG0823738

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: QHF92_RS13115
• Genome accession: NZ_CP123994
• Coordinates: 2608169..2608786 (-)
• Length: 205 a.a.
• NCBI ID: WP_060399060.1
• Uniprot ID: A0A9Q4HTS0
• Organism: Bacillus inaquosorum strain M3
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2603169..2613786

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QHF92_RS13085 (QHF92_13085)	rpsT	2603471..2603737 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
QHF92_RS13090 (QHF92_13090)	holA	2603752..2604795 (-)	1044	WP_060399059.1	DNA polymerase III subunit delta	-
QHF92_RS13095 (QHF92_13095)	-	2604835..2604984 (-)	150	WP_003229985.1	hypothetical protein	-
QHF92_RS13100 (QHF92_13100)	-	2605025..2605159 (+)	135	WP_003229983.1	YqzM family protein	-
QHF92_RS13105 (QHF92_13105)	comEC	2605199..2607529 (-)	2331	WP_060400041.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QHF92_RS13110 (QHF92_13110)	-	2607533..2608102 (-)	570	WP_003237106.1	ComE operon protein 2	-
QHF92_RS13115 (QHF92_13115)	comEA	2608169..2608786 (-)	618	WP_060399060.1	helix-hairpin-helix domain-containing protein	Machinery gene
QHF92_RS13120 (QHF92_13120)	comER	2608870..2609691 (+)	822	WP_060399061.1	late competence protein ComER	-
QHF92_RS13125 (QHF92_13125)	-	2609757..2610500 (-)	744	WP_060399062.1	class I SAM-dependent methyltransferase	-
QHF92_RS13130 (QHF92_13130)	rsfS	2610497..2610853 (-)	357	WP_003237112.1	ribosome silencing factor	-
QHF92_RS13135 (QHF92_13135)	yqeK	2610871..2611431 (-)	561	WP_003237115.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
QHF92_RS13140 (QHF92_13140)	-	2611421..2611990 (-)	570	WP_019258940.1	nicotinate-nucleotide adenylyltransferase	-
QHF92_RS13145 (QHF92_13145)	yhbY	2612002..2612292 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-
QHF92_RS13150 (QHF92_13150)	aroE	2612286..2613128 (-)	843	WP_060399063.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 21754.65 Da
• Isoelectric Point: 4.9529

>NTDB_id=823738 QHF92_RS13115 WP_060399060.1 2608169..2608786(-) (comEA) [Bacillus inaquosorum strain M3]
MNWLNQYKKTIILAASAAVFIAAIFIFASGKNKGPVKQAVSTETENAEVKQEAVKDESNKTIVIDIKGAVLHPGVYEMRT
GDRVSQAIEKAGGASEQADEMQVNLAELLQDGTVVYIPKKGEETAVQQGAVGAVQSDGGKGALVNINTATLDELQGISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=823738 QHF92_RS13115 WP_060399060.1 2608169..2608786(-) (comEA) [Bacillus inaquosorum strain M3]
ATGAATTGGTTGAATCAGTATAAAAAAACAATAATTTTAGCGGCTTCTGCGGCTGTTTTCATAGCGGCTATTTTCATCTT
TGCCAGCGGAAAAAACAAAGGGCCGGTGAAGCAGGCTGTATCAACTGAGACAGAAAATGCGGAGGTAAAGCAGGAAGCAG
TCAAAGACGAGTCAAACAAAACAATAGTGATAGACATTAAAGGTGCTGTTCTGCATCCTGGCGTTTATGAAATGCGAACA
GGGGACAGAGTATCTCAGGCAATTGAGAAAGCGGGCGGGGCCAGTGAACAAGCAGACGAAATGCAAGTGAACTTGGCGGA
GCTGCTTCAGGACGGGACAGTGGTGTACATCCCGAAAAAGGGAGAGGAGACGGCGGTGCAGCAAGGAGCCGTAGGCGCTG
TTCAAAGCGATGGAGGGAAGGGAGCGCTCGTAAATATCAATACAGCCACCTTAGACGAATTACAAGGCATCTCAGGGGTG
GGACCGTCAAAAGCTGAAGCTATTATTGCATACCGGGAGGAAAACGGGCGTTTCCAGACAATTGAAGATATCACTAAGGT
TTCAGGAATAGGTGAAAAGTCGTTTGAGAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (142-203)

• SLBB domain (SLBB) (63-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	88.293	100	0.883
comEA	Staphylococcus aureus MW2	38.636	100	0.415
comEA	Staphylococcus aureus N315	37.273	100	0.4
comEA	Lactococcus lactis subsp. cremoris KW2	35.78	100	0.38
comEA/celA/cilE	Streptococcus pneumoniae R6	36.715	100	0.371
comEA/celA/cilE	Streptococcus pneumoniae Rx1	36.715	100	0.371
comEA/celA/cilE	Streptococcus pneumoniae D39	36.715	100	0.371