Detailed information NTG0822623

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: QFB56_RS14355
• Genome accession: NZ_CP123765
• Coordinates: 2938074..2939192 (+)
• Length: 372 a.a.
• NCBI ID: WP_032057670.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain AP8900
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2933074..2944192

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QFB56_RS14345 (QFB56_14345)	yggS	2936198..2936890 (-)	693	WP_032057669.1	YggS family pyridoxal phosphate-dependent enzyme	-
QFB56_RS14350 (QFB56_14350)	pilT	2937017..2938054 (+)	1038	WP_002121749.1	type IV pilus twitching motility protein PilT	Machinery gene
QFB56_RS14355 (QFB56_14355)	pilU	2938074..2939192 (+)	1119	WP_032057670.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
QFB56_RS14360 (QFB56_14360)	fur	2939262..2939699 (-)	438	WP_002121758.1	ferric iron uptake transcriptional regulator	-
QFB56_RS14365 (QFB56_14365)	omlA	2939811..2940209 (+)	399	WP_002121740.1	outer membrane protein assembly factor BamE	-
QFB56_RS14370 (QFB56_14370)	-	2940274..2940588 (-)	315	WP_017481335.1	RnfH family protein	-
QFB56_RS14375 (QFB56_14375)	-	2940588..2941655 (-)	1068	WP_031944146.1	membrane protein	-
QFB56_RS14380 (QFB56_14380)	-	2941809..2942264 (-)	456	WP_002121698.1	bacteriohemerythrin	-
QFB56_RS14385 (QFB56_14385)	-	2942516..2943364 (-)	849	WP_014205980.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41975.16 Da
• Isoelectric Point: 6.5062

>NTDB_id=822623 QFB56_RS14355 WP_032057670.1 2938074..2939192(+) (pilU) [Acinetobacter pittii strain AP8900]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEIIGQLLHSIMSEKQRKEFAETRECNFAIMNRDKSA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISYRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKSGQITYKDALKHADSPNDLRLTIKLAEEDPEQIAGTNQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=822623 QFB56_RS14355 WP_032057670.1 2938074..2939192(+) (pilU) [Acinetobacter pittii strain AP8900]
ATGGATTTTAATGACCTGCTCAACCTGATGGTTGAAAAAAAATCATCCGACCTCTTTATTACAGATGGCGTTGCACCATC
GATGAAGATTAACGGGCAAATTGTTCCCATTTCAAAAAATAGTCTTTCAGGCGAAATTATTGGTCAACTATTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCTGAGACTCGTGAATGTAATTTTGCGATTATGAACCGCGATAAAAGTGCG
CGCTTTCGTGTCAGTGCTTTTCAGCAACGCGACATGCCAGGCATGGTATTACGTCGAATTGAAACTAAAATTCCTTCAAT
TGATGACTTGCAATTACCACCTGTGCTTAAAGATTTATCGATGACCAAACGTGGCATCATTATTTTTGTAGGGGCAACAG
GTACAGGTAAATCGACATCTTTGGCTTCAATGATTAGCTATCGGAACCATAACTCTAAAGGTCATATCATTACCATTGAA
GACCCTATCGAGTTTATTCATGAACATGCTGGTTGCATCATTACCCAACGTGAAGTCGGGATTGATACAGACTCATTCGA
AATTGCCTTAAAGAATACTTTGCGACAAGCACCCGATGTAATCTTGATTGGTGAGATTCGCTCTCGTGAAGTCATGGACT
ATGCGATTGGTTTTGCCGAAACAGGTCACCTTGTATTAGCCACAATGCATGCGAACAACGCCAACCAAGCACTTGACCGT
ATTATTCACTTCTTTGAAAGTGACCGTCATAGCCAGCTCTACATGGATTTATCGCTTAATTTAAAGGCCATGATTGCACA
GCAACTTATTCCGACTCCAGATGGTAATTCTCGCCGTGCAGCGATTGAGATTCTCATTAACTCCCCATTAATTTCAGACT
ATATTCGTAAAGGTGAAATTCATGAAATTAAAGATTTAATGAAACGCTCACGTGAACTCGGTATGCAAACTTTCGACCAA
GCACTGTTTGATCTTTATAAGTCAGGCCAAATTACCTACAAAGATGCATTAAAACATGCCGACTCACCAAACGATTTACG
TTTAACAATTAAGCTTGCCGAAGAAGATCCTGAGCAAATTGCAGGCACAAATCAGCATTTAACCTTCGACAGACAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (32-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	69.003	99.731	0.688
pilU	Vibrio cholerae strain A1552	54.054	99.462	0.538
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392
pilT	Legionella pneumophila strain Lp02	39.941	90.86	0.363
pilT	Legionella pneumophila strain ERS1305867	39.941	90.86	0.363