Detailed information NTG0814185

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: QBJ73_RS15075
• Genome accession: NZ_CP121776
• Coordinates: 3138695..3139888 (+)
• Length: 397 a.a.
• NCBI ID: WP_010326644.1
• Uniprot ID: A0A239RZK9
• Organism: Acinetobacter johnsonii strain AYTCM
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3133695..3144888

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QBJ73_RS15055 (QBJ73_15070)	-	3133999..3134289 (+)	291	WP_308469446.1	hypothetical protein	-
QBJ73_RS15065 (QBJ73_15080)	-	3135074..3136915 (+)	1842	WP_308469447.1	bifunctional diguanylate cyclase/phosphodiesterase	-
QBJ73_RS19960	-	3137302..3137448 (-)	147	WP_171254088.1	hypothetical protein	-
QBJ73_RS15070 (QBJ73_15085)	-	3137394..3138455 (+)	1062	WP_010326643.1	3-deoxy-7-phosphoheptulonate synthase	-
QBJ73_RS15075 (QBJ73_15090)	pilU	3138695..3139888 (+)	1194	WP_010326644.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
QBJ73_RS15080 (QBJ73_15095)	-	3139936..3141114 (-)	1179	Protein_2915	MFS transporter	-
QBJ73_RS15085 (QBJ73_15100)	gcvH	3141367..3141747 (-)	381	WP_058951997.1	glycine cleavage system protein GcvH	-
QBJ73_RS15090 (QBJ73_15105)	-	3141819..3142847 (-)	1029	WP_004693238.1	AraC family transcriptional regulator	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 44702.08 Da
• Isoelectric Point: 6.5063

>NTDB_id=814185 QBJ73_RS15075 WP_010326644.1 3138695..3139888(+) (pilU) [Acinetobacter johnsonii strain AYTCM]
MYSAELLEEARRMMFHMLSKVVEYGGSDLFISADFPPSIKHQGLMKPLGQQNLPSDQTKLFAYSLMNEKQRLEFETELEC
NFAINVPNVSRFRVNVFQQQLHVGMVIRTITAEIPNFTKLQLPTSLKDVIMEKRGLVLVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQALDRIINFFPDERRNQLLMDLSSNMKAIISQRLVRTEDGRGRRAAVEIMLNTPLMSDLILKGNFHELKEVMSKS
RELGMQTFDQALFDLYNQGAIAYEEALRNADSVNELRLQIKLKSSRANPQLNSNSALSFDQAVAEKAKDAEEEKADA

Nucleotide

• Length: 1194 bp

>NTDB_id=814185 QBJ73_RS15075 WP_010326644.1 3138695..3139888(+) (pilU) [Acinetobacter johnsonii strain AYTCM]
ATGTATTCTGCAGAACTTTTAGAAGAAGCCCGTCGGATGATGTTTCACATGCTCAGCAAAGTGGTTGAGTATGGTGGTTC
AGACTTATTTATATCTGCAGACTTTCCGCCAAGTATTAAGCATCAGGGCCTCATGAAGCCATTGGGTCAACAAAATTTGC
CATCTGATCAGACCAAACTCTTTGCTTATAGTTTAATGAACGAAAAGCAACGATTGGAGTTCGAAACCGAGCTTGAGTGT
AATTTTGCAATTAACGTTCCCAATGTTTCGCGTTTTCGTGTCAATGTTTTTCAGCAGCAACTGCATGTGGGGATGGTGAT
TCGTACGATTACTGCGGAAATTCCTAACTTCACTAAGTTACAACTTCCAACGTCTTTAAAAGACGTAATTATGGAAAAAC
GTGGTTTGGTCCTCGTTGTCGGTGGTACAGGGTCGGGTAAATCGACGTCTTTAGCAGCCATGATTGATCATCGAAATGAA
AACTCGGCAGGGCACATTATTACAGTTGAAGACCCTGTGGAGTATGTACACAAGCATAAGAAATCGATGATTACTCATCG
GGAAGTGGGTGTGGACTGTCATTCTTGGCACAATGCTTTGAAAAATACTCTGCGCCAAGCGCCCGATGTCATTTTAATTG
GTGAGATTCGTGACACGGAGACGATGGAACATGCCATAGCTTTTGCGGAAACAGGCCACTTATGCCTGGGGACACTGCAT
GCCAATAATGCAAATCAGGCTTTAGATCGAATTATTAACTTTTTCCCAGACGAACGTCGCAATCAACTTTTGATGGACTT
ATCTTCCAATATGAAGGCGATTATTTCACAGCGTCTGGTGCGAACTGAAGATGGGCGTGGCCGCCGAGCAGCAGTGGAAA
TCATGCTCAATACACCGTTGATGTCAGACTTGATACTTAAAGGGAATTTCCACGAACTCAAAGAAGTGATGTCGAAATCA
CGAGAGTTAGGCATGCAGACTTTTGATCAGGCTTTGTTTGATTTATACAATCAAGGTGCAATCGCTTATGAAGAAGCACT
ACGAAATGCAGACTCGGTCAATGAATTACGTCTACAGATTAAATTAAAGAGTAGTCGTGCCAACCCGCAGTTAAACTCAA
ATAGTGCTTTGTCTTTTGATCAAGCGGTTGCTGAAAAAGCCAAAGACGCTGAAGAAGAGAAGGCCGACGCCTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (122-282)

3D structure

• AlphaFold DB: A0A239RZK9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	59.053	90.428	0.534
pilU	Acinetobacter baylyi ADP1	55.096	91.436	0.504
pilU	Vibrio cholerae strain A1552	50.578	87.154	0.441
pilT	Legionella pneumophila strain Lp02	42.478	85.39	0.363
pilT	Legionella pneumophila strain ERS1305867	42.478	85.39	0.363
pilT	Acinetobacter baylyi ADP1	43.598	82.62	0.36