Detailed information NTG0814093

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QBK97_RS10815
• Genome accession: NZ_CP121768
• Coordinates: 2191968..2193095 (+)
• Length: 375 a.a.
• NCBI ID: WP_279368256.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain d76
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2186968..2198095

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QBK97_RS10790 (QBK97_10790)	-	2188049..2188324 (+)	276	WP_075630739.1	type II toxin-antitoxin system RelE/ParE family toxin	-
QBK97_RS10795 (QBK97_10795)	-	2188363..2188743 (+)	381	WP_075630738.1	helix-turn-helix transcriptional regulator	-
QBK97_RS10800 (QBK97_10800)	-	2189389..2190330 (-)	942	WP_164692181.1	hypothetical protein	-
QBK97_RS10805 (QBK97_10805)	rfaD	2190422..2191348 (-)	927	WP_021110191.1	ADP-glyceromanno-heptose 6-epimerase	-
QBK97_RS10810 (QBK97_10810)	def	2191360..2191872 (-)	513	WP_005712670.1	peptide deformylase	-
QBK97_RS10815 (QBK97_10815)	dprA	2191968..2193095 (+)	1128	WP_279368256.1	DNA-processing protein DprA	Machinery gene
QBK97_RS10820 (QBK97_10820)	-	2193148..2193984 (+)	837	WP_010787337.1	ABC transporter substrate-binding protein	-
QBK97_RS10825 (QBK97_10825)	-	2193984..2194970 (+)	987	WP_279368257.1	iron ABC transporter permease	-
QBK97_RS10830 (QBK97_10830)	-	2194970..2195758 (+)	789	WP_160405500.1	heme ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41758.93 Da
• Isoelectric Point: 6.0021

>NTDB_id=814093 QBK97_RS10815 WP_279368256.1 2191968..2193095(+) (dprA) [Glaesserella parasuis strain d76]
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKTALKQMGWNERQIQRWFNPEHKWIDQALQWAEQDQQRILTLF
DEDYPFLLKQISTAPPVLFVRGNVESLSLPQIAIVGSRDYSHYGEHWAGHFSAELVKHQLAVTSGLAIGIDGFCHQRAVN
ENGITIAVLGSGLDQVYPARHKKLAEQIVETSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNAVQNPYSEGCHKLIKEGALLVENIDDILEAIAWQRQSVHIQPSLFDTKPKQAVKSAPKLAKKLPEL
TACQQQLFEQISLEPISIDDLAKATDMAVETALIELLNLELLGVVKQVRGGYVIT

Nucleotide

• Length: 1128 bp

>NTDB_id=814093 QBK97_RS10815 WP_279368256.1 2191968..2193095(+) (dprA) [Glaesserella parasuis strain d76]
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCGCAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATATGACAAAACCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATCGATCAGGCATTGCAATGGGCGGAACAGGATCAGCAACGGATTTTAACCTTATTT
GACGAAGATTATCCTTTTTTATTGAAGCAGATCAGCACTGCTCCCCCTGTGCTTTTTGTGCGTGGGAATGTTGAAAGTTT
ATCGTTACCGCAGATAGCTATCGTCGGCAGTCGAGATTATTCCCACTATGGCGAACACTGGGCAGGGCATTTTTCGGCGG
AATTAGTGAAACATCAGCTTGCTGTCACCAGTGGCTTAGCCATAGGCATAGATGGATTTTGCCATCAACGTGCGGTCAAT
GAGAATGGAATTACCATTGCGGTTTTAGGCAGTGGTTTAGACCAAGTTTACCCTGCTCGCCACAAAAAACTTGCTGAACA
AATCGTTGAAACAAGCGGTGCGTTAGTGTCGGAATTTTTCCCTAGCCAGCCACCGATTGCTGAGAATTTTCCTAGACGAA
ATCGTATTATCAGCGGATTATCGCTCGGAACATTGGTTATTGAAGCAACAGTGAATAGTGGCTCGCTCATTACTGCCCGT
TATGCGTTAGAGCAAGGGAGAGAAGTCTTTGCATTGCCGAACGCAGTTCAAAACCCATATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGGGCATTACTGGTTGAAAATATTGACGACATTTTAGAAGCGATTGCGTGGCAACGGCAATCAGTGCATA
TTCAACCAAGCCTGTTTGATACGAAACCTAAACAAGCGGTGAAATCTGCCCCAAAATTGGCAAAAAAACTACCTGAACTG
ACCGCTTGTCAGCAACAACTGTTTGAACAGATTAGCCTTGAGCCGATTAGCATTGATGATCTTGCCAAAGCGACGGATAT
GGCGGTAGAAACCGCATTAATTGAGCTGTTAAATTTGGAGTTGTTGGGTGTTGTGAAGCAGGTGAGAGGGGGGTATGTAA
TCACTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (314-371)

• DNA recombination-mediator protein A (DNA_processg_A) (69-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	97.6	100	0.976
dprA	Haemophilus influenzae Rd KW20	53.412	89.867	0.48
dprA	Vibrio campbellii strain DS40M4	46.917	99.467	0.467
dprA	Vibrio cholerae strain A1552	44.149	100	0.443
dprA	Legionella pneumophila strain ERS1305867	38.624	100	0.389
dprA	Neisseria gonorrhoeae MS11	43.492	84	0.365
dprA	Neisseria gonorrhoeae strain FA1090	43.175	84	0.363