Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   P3R60_RS06210 Genome accession   NZ_CP120510
Coordinates   1180528..1181676 (-) Length   382 a.a.
NCBI ID   WP_218653843.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP21-2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1175528..1186676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3R60_RS06185 - 1176087..1176443 (-) 357 WP_316605998.1 helix-turn-helix transcriptional regulator -
  P3R60_RS06190 - 1176563..1176766 (-) 204 WP_316605999.1 DUF951 domain-containing protein -
  P3R60_RS06195 dnaN 1176847..1177983 (-) 1137 WP_316606000.1 DNA polymerase III subunit beta -
  P3R60_RS06200 dnaA 1178137..1179504 (-) 1368 WP_218653845.1 chromosomal replication initiator protein DnaA -
  P3R60_RS06205 spo0J 1179707..1180474 (-) 768 WP_115131127.1 ParB/RepB/Spo0J family partition protein Regulator
  P3R60_RS06210 htrA 1180528..1181676 (-) 1149 WP_218653843.1 S1C family serine protease Regulator
  P3R60_RS06215 rlmH 1181975..1182454 (+) 480 WP_218653842.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  P3R60_RS06230 - 1182860..1185454 (-) 2595 WP_316606001.1 YfhO family protein -

Sequence


Protein


Download         Length: 382 a.a.        Molecular weight: 40671.25 Da        Isoelectric Point: 4.4215

>NTDB_id=805861 P3R60_RS06210 WP_218653843.1 1180528..1181676(-) (htrA) [Streptococcus pluranimalium strain SP21-2]
MAGAYLMLYFSNNLSTPLNNSQSKAKTSNVVYNNTTNTTKAAKKVQDAVVSVINYQKNADSSLNNLYSQLFGGDNDKRSE
DDLSVYSEGSGVIYRKEGGSAYIVTNNHVIDGAENIEIMLADGTKVVGELVGSDTYSDLAVVKISDEKVSTVAKFADSDK
LNVGEVAIAMGSPLGSEYANSVTQGIVSSLSRTVTLKNEEGETISTNAIQTDAAINPGNSGGALINIEGQVIGINSSKIS
STSTAREAVEGMGFAIPSNDVIKIINQLEKNGQVTRPALGIFMANLSDLSTSAISELNIPNKLTGGIVVATVQDNMPASG
KLKQYDVITEIDGEEITSTSDLQSILYDHEIGDTIKITYYRGKDKQTTDIKLSKSTQDLENR

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=805861 P3R60_RS06210 WP_218653843.1 1180528..1181676(-) (htrA) [Streptococcus pluranimalium strain SP21-2]
ATGGCAGGAGCTTATCTCATGCTCTATTTTTCCAATAACCTGTCAACTCCTTTGAATAATTCGCAATCCAAAGCCAAAAC
AAGCAATGTGGTTTACAATAATACTACCAACACGACCAAAGCAGCCAAAAAAGTCCAAGATGCTGTTGTATCAGTTATTA
ACTACCAAAAGAATGCCGATTCTTCTTTAAATAATCTTTATAGTCAACTGTTTGGTGGAGACAATGATAAGCGTTCTGAA
GATGATTTGAGTGTCTACAGCGAAGGCTCTGGCGTTATTTATCGAAAAGAAGGTGGATCAGCTTACATCGTCACTAACAA
TCACGTTATTGATGGAGCTGAAAATATTGAAATTATGCTTGCTGATGGAACAAAAGTCGTCGGAGAACTTGTTGGATCTG
ATACTTACTCCGATTTAGCTGTTGTCAAAATTTCTGATGAAAAAGTATCTACAGTTGCGAAGTTCGCAGACTCTGATAAA
TTAAACGTTGGAGAAGTAGCGATTGCAATGGGTAGCCCTCTAGGAAGTGAATATGCTAACTCTGTTACACAAGGGATTGT
GTCAAGTCTAAGCCGTACAGTAACGCTTAAAAATGAGGAGGGTGAAACCATTTCAACCAATGCTATCCAAACAGATGCTG
CCATCAATCCTGGTAACTCTGGTGGTGCTTTGATTAATATTGAAGGACAAGTTATTGGTATCAATTCAAGTAAAATCTCA
TCTACCTCAACTGCTCGCGAAGCCGTAGAAGGCATGGGATTTGCTATCCCATCTAATGATGTCATCAAAATAATCAACCA
GTTAGAAAAAAATGGACAAGTCACTCGCCCAGCACTAGGCATCTTTATGGCGAATCTTAGCGATCTCTCAACAAGTGCTA
TCTCAGAGCTTAATATTCCAAATAAGCTCACTGGAGGTATTGTTGTTGCCACTGTTCAAGATAACATGCCTGCCTCAGGT
AAACTGAAACAATATGATGTCATCACTGAAATTGATGGTGAAGAAATAACATCAACCAGTGATCTACAAAGTATTCTTTA
TGATCACGAAATTGGTGATACGATTAAAATCACCTACTACCGTGGTAAAGATAAGCAGACCACTGACATTAAGTTAAGCA
AGTCAACACAAGATTTAGAAAACCGCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

66.31

97.906

0.649

  htrA Streptococcus gordonii str. Challis substr. CH1

59.211

99.476

0.589

  htrA Streptococcus pneumoniae D39

64.183

91.361

0.586

  htrA Streptococcus pneumoniae TIGR4

64.183

91.361

0.586

  htrA Streptococcus mitis NCTC 12261

64.183

91.361

0.586

  htrA Streptococcus pneumoniae R6

64.183

91.361

0.586

  htrA Streptococcus pneumoniae Rx1

64.183

91.361

0.586