Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   P3R60_RS06205 Genome accession   NZ_CP120510
Coordinates   1179707..1180474 (-) Length   255 a.a.
NCBI ID   WP_115131127.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP21-2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1174707..1185474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3R60_RS06180 ychF 1174889..1176004 (-) 1116 WP_278024782.1 redox-regulated ATPase YchF -
  P3R60_RS06185 - 1176087..1176443 (-) 357 WP_316605998.1 helix-turn-helix transcriptional regulator -
  P3R60_RS06190 - 1176563..1176766 (-) 204 WP_316605999.1 DUF951 domain-containing protein -
  P3R60_RS06195 dnaN 1176847..1177983 (-) 1137 WP_316606000.1 DNA polymerase III subunit beta -
  P3R60_RS06200 dnaA 1178137..1179504 (-) 1368 WP_218653845.1 chromosomal replication initiator protein DnaA -
  P3R60_RS06205 spo0J 1179707..1180474 (-) 768 WP_115131127.1 ParB/RepB/Spo0J family partition protein Regulator
  P3R60_RS06210 htrA 1180528..1181676 (-) 1149 WP_218653843.1 S1C family serine protease Regulator
  P3R60_RS06215 rlmH 1181975..1182454 (+) 480 WP_218653842.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  P3R60_RS06230 - 1182860..1185454 (-) 2595 WP_316606001.1 YfhO family protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29321.59 Da        Isoelectric Point: 8.4256

>NTDB_id=805860 P3R60_RS06205 WP_115131127.1 1179707..1180474(-) (spo0J) [Streptococcus pluranimalium strain SP21-2]
MEDILKDIQISDITTNPNQPRHHFNEEEIKELAESIANNGLIQPIIVRPSDIIGYELIAGERRLRAHQYLGKKSIKAVIT
DKSYQESMKQALIENLQRADLNPIEEAKAYQNILDKLELTHQELAISVGKSRPYISNQLRLLQLSKSWQNAIRKGVVMPG
HARLILNLSPKEQDIWLNDIISQQLSVHQLEQKLKQERHSPSSKEKVIFQDHLEKELQKSLGLEVSISGFQQKKGQLSIS
FANEEEFNRIINKLK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=805860 P3R60_RS06205 WP_115131127.1 1179707..1180474(-) (spo0J) [Streptococcus pluranimalium strain SP21-2]
ATGGAAGATATTTTAAAAGACATACAAATCAGTGATATTACAACAAATCCTAACCAACCTCGGCACCATTTCAATGAAGA
AGAGATTAAAGAACTTGCTGAATCAATAGCTAATAATGGACTGATCCAACCTATTATCGTTAGACCTTCTGATATTATTG
GATACGAACTAATCGCTGGAGAAAGGCGTTTAAGAGCGCATCAATATCTTGGCAAAAAATCTATTAAAGCTGTTATTACC
GATAAAAGTTATCAAGAAAGTATGAAGCAAGCTCTTATCGAAAATCTTCAAAGAGCTGACTTGAATCCCATTGAAGAAGC
CAAGGCTTACCAAAATATACTTGATAAATTAGAGCTTACCCATCAAGAATTAGCTATTAGTGTCGGAAAATCTCGTCCCT
ATATTTCTAATCAATTGCGCTTACTCCAACTTTCTAAATCTTGGCAAAATGCTATTCGAAAAGGGGTGGTTATGCCAGGC
CATGCACGACTAATTCTAAACCTCTCACCAAAAGAGCAAGACATCTGGCTAAATGATATTATTAGTCAACAATTAAGTGT
ACATCAATTAGAACAGAAATTAAAACAAGAGCGTCATTCGCCTTCTTCCAAAGAAAAAGTCATTTTTCAAGATCATCTCG
AAAAAGAACTGCAAAAATCGCTTGGTTTAGAAGTTAGCATTTCAGGATTTCAGCAAAAAAAAGGACAACTATCGATTAGC
TTCGCAAATGAAGAAGAATTCAACAGAATTATCAACAAGCTAAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(149-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

51.765

100

0.518