Detailed information NTG0805564

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: P3G65_RS06035
• Genome accession: NZ_CP120417
• Coordinates: 1151965..1152834 (+)
• Length: 289 a.a.
• NCBI ID: WP_019291673.1
• Uniprot ID: -
• Organism: Lactococcus sp. bn62
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1146965..1157834

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3G65_RS06015 (P3G65_06025)	-	1147289..1147909 (+)	621	WP_019291676.1	GntR family transcriptional regulator	-
P3G65_RS06020 (P3G65_06030)	-	1148115..1149317 (+)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
P3G65_RS06025 (P3G65_06035)	-	1149310..1151034 (+)	1725	WP_019291675.1	ABC transporter permease/substrate binding protein	-
P3G65_RS06030 (P3G65_06040)	budA	1151180..1151878 (+)	699	WP_019291674.1	acetolactate decarboxylase	-
P3G65_RS06035 (P3G65_06045)	dprA	1151965..1152834 (+)	870	WP_019291673.1	DNA-processing protein DprA	Machinery gene
P3G65_RS06040 (P3G65_06050)	topA	1153023..1155173 (+)	2151	WP_029343511.1	type I DNA topoisomerase	-
P3G65_RS06045 (P3G65_06055)	trmFO	1155222..1156565 (+)	1344	WP_019291671.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
P3G65_RS06050 (P3G65_06060)	-	1156639..1156860 (-)	222	WP_019292266.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32915.11 Da
• Isoelectric Point: 9.9099

>NTDB_id=805564 P3G65_RS06035 WP_019291673.1 1151965..1152834(+) (dprA) [Lactococcus sp. bn62]
MIKNFEILRLKKAGMSNLGILKLIDYQRRHEARLTLRQLSRIAEVKTVPNFIESYKSQDVKRLREQYKIFPSFSILDDIY
PEWLRETYNPPALLFYRGDLKLLSLPKLGFVGSREMSKEAPRIIHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLAAHELVLSEYLVGEQPLKFHFPERNRIIAGLSRGVVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLYEGNFFP

Nucleotide

• Length: 870 bp

>NTDB_id=805564 P3G65_RS06035 WP_019291673.1 1151965..1152834(+) (dprA) [Lactococcus sp. bn62]
ATGATTAAAAACTTTGAAATATTACGTTTGAAAAAAGCAGGAATGTCTAATTTAGGGATTTTGAAACTGATTGATTATCA
GAGGAGGCATGAAGCAAGACTCACTCTACGCCAGTTATCGCGGATTGCAGAGGTCAAAACTGTCCCTAATTTTATTGAGA
GTTATAAGAGTCAAGATGTGAAACGACTTCGTGAGCAATACAAAATTTTCCCCTCCTTTTCCATTTTAGATGACATTTAT
CCCGAATGGCTGAGAGAAACATATAATCCACCTGCCCTCCTTTTTTACCGAGGAGATCTTAAATTGCTTAGTCTTCCTAA
ACTTGGGTTTGTAGGCAGTCGTGAAATGTCTAAGGAAGCACCAAGAATAATCCACAAGCTTATTGAGGAATTAAAGCAAA
ACTTTGTTATTGTGAGCGGATTAGCACGCGGTGTTGACACCTCAAGCCATGTAGCAGCTGTAAAACAAAAAACTCCAACC
ATTGCTGTCATTGGTAATGGGTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAATACTTAGCAGCACATGA
ATTAGTTTTATCAGAATACCTTGTAGGAGAGCAACCCCTCAAGTTTCATTTCCCAGAGAGAAATAGAATCATTGCTGGTC
TTTCCCGTGGAGTTGTCGTTGTGGAAGCAAAACAACGTAGTGGTAGCCTTATCACAAGTCGTTATGCTTTAGAGGGTAAT
AGAGAAGTTTTTGCTGTACCTGGAGATATTTTGAATAGAAATGCTTCTGGCTGTAATCAATTAATCCAACAAGGTGCAGC
CAAGCTTGTCACTCATGGACAAGATATTTTAGATGAATTTTATTTATATGAAGGGAATTTCTTTCCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.604	97.924	0.623
dprA	Streptococcus mutans UA159	55.197	96.54	0.533
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus mitis SK321	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	52.688	96.54	0.509
dprA	Latilactobacillus sakei subsp. sakei 23K	38.909	95.156	0.37