Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   P1Y72_RS04930 Genome accession   NZ_CP119599
Coordinates   1043549..1044772 (-) Length   407 a.a.
NCBI ID   WP_002994926.1    Uniprot ID   A0A4U9TAA9
Organism   Streptococcus pyogenes strain 1133     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1038549..1049772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1Y72_RS04910 (P1Y72_04910) - 1039533..1039730 (-) 198 WP_002981933.1 DUF951 family protein -
  P1Y72_RS04915 (P1Y72_04915) dnaN 1039805..1040941 (-) 1137 WP_002987661.1 DNA polymerase III subunit beta -
  P1Y72_RS04920 (P1Y72_04920) dnaA 1041096..1042451 (-) 1356 WP_002987659.1 chromosomal replication initiator protein DnaA -
  P1Y72_RS04925 (P1Y72_04925) spo0J 1042684..1043460 (-) 777 WP_014407987.1 ParB/RepB/Spo0J family partition protein Regulator
  P1Y72_RS04930 (P1Y72_04930) htrA 1043549..1044772 (-) 1224 WP_002994926.1 trypsin-like peptidase domain-containing protein Regulator
  P1Y72_RS04935 (P1Y72_04935) rlmH 1044984..1045463 (+) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  P1Y72_RS04945 (P1Y72_04945) - 1045858..1046622 (+) 765 Protein_962 IS30 family transposase -

Sequence


Protein


Download         Length: 407 a.a.        Molecular weight: 42760.38 Da        Isoelectric Point: 7.3920

>NTDB_id=800055 P1Y72_RS04930 WP_002994926.1 1043549..1044772(-) (htrA) [Streptococcus pyogenes strain 1133]
MPSMKHILKSLSILLIGFLGGLIAIITFNNLYPHSPSKINSGKATTSNMVFNNTTNTTKAVKAVQNAVVSVINYQDNPSS
SLSNPYTKLFGEGRSKENKDAELSIFSEGSGVIYRKDGNSAYVVTNNHVIDGAKRIEILMADGSKVVGELVGADTYSDLA
VVKISSDKIKTVAEFADSTKLNVGEVAIAIGSPLGTQYANSVTQGIVSSLSRTVTLKNENGETVSTNAIQTDAAINPGNS
GGPLINIEGQVIGINSSKISSTPTGSNGNSGAVEGIGFAIPSTDVIKIIKQLETNGEVIRPALGISMVNLNDLSTNALSQ
INIPTSVTGGIVVAEVKEGMPASGKLAQYDVITEIDGKTVNSISDLQSSLYGHDINDTIKVTFYRGTTKKKADIKLTKTT
QDLTKTQ

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=800055 P1Y72_RS04930 WP_002994926.1 1043549..1044772(-) (htrA) [Streptococcus pyogenes strain 1133]
ATGCCAAGTATGAAACATATCTTAAAATCCTTAAGTATTTTACTAATTGGATTTTTAGGAGGATTAATAGCAATTATTAC
ATTCAATAATCTCTACCCACATTCTCCATCAAAAATAAATTCAGGTAAGGCAACAACTAGTAATATGGTTTTTAACAACA
CAACCAATACTACTAAAGCTGTCAAAGCTGTTCAAAATGCAGTTGTATCAGTTATTAATTATCAAGATAACCCTTCTTCA
TCCCTTTCTAACCCTTATACAAAACTCTTTGGAGAAGGGCGTTCAAAAGAGAATAAGGATGCTGAATTATCTATTTTTAG
TGAAGGATCTGGGGTCATTTATCGAAAAGATGGCAACTCCGCTTACGTTGTTACTAATAACCATGTTATCGACGGAGCTA
AACGAATTGAAATTCTTATGGCAGACGGATCTAAAGTTGTTGGTGAATTAGTTGGAGCTGATACTTATTCGGATTTAGCT
GTTGTTAAGATCTCTTCAGATAAGATAAAAACAGTAGCTGAATTTGCAGATTCTACAAAACTAAATGTTGGAGAAGTTGC
TATTGCTATCGGCAGCCCACTAGGAACACAATACGCTAATTCTGTTACTCAAGGAATCGTCTCTAGTTTAAGTCGTACTG
TAACTTTAAAAAACGAGAATGGTGAGACTGTCTCAACAAATGCTATTCAGACAGATGCTGCTATTAACCCTGGAAACTCT
GGTGGACCACTAATTAATATTGAGGGGCAAGTAATCGGAATTAATTCAAGTAAAATTTCTTCTACCCCAACTGGTAGCAA
CGGTAATAGTGGTGCTGTTGAAGGAATTGGTTTTGCTATCCCATCTACTGATGTTATTAAAATTATTAAACAACTAGAAA
CTAATGGTGAAGTTATCAGACCTGCTCTTGGAATATCCATGGTCAATTTAAATGACTTATCCACAAATGCTCTTAGTCAA
ATTAATATTCCAACTAGTGTAACTGGTGGTATTGTAGTAGCAGAAGTTAAGGAAGGAATGCCGGCATCTGGCAAACTTGC
TCAGTACGATGTGATTACAGAAATTGATGGCAAAACAGTTAATTCAATTAGTGATTTACAAAGTAGTCTATACGGACACG
ATATTAATGATACTATTAAAGTAACTTTTTATAGAGGAACTACAAAGAAAAAAGCAGATATCAAATTAACAAAAACTACT
CAAGATTTGACTAAAACGCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9TAA9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.881

99.263

0.614

  htrA Streptococcus gordonii str. Challis substr. CH1

55.224

98.771

0.545

  htrA Streptococcus mitis NCTC 12261

53.071

100

0.531

  htrA Streptococcus pneumoniae Rx1

52.826

100

0.528

  htrA Streptococcus pneumoniae D39

52.826

100

0.528

  htrA Streptococcus pneumoniae R6

52.826

100

0.528

  htrA Streptococcus pneumoniae TIGR4

52.826

100

0.528