Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   P1Y72_RS04925 Genome accession   NZ_CP119599
Coordinates   1042684..1043460 (-) Length   258 a.a.
NCBI ID   WP_014407987.1    Uniprot ID   A0A4U9TLU5
Organism   Streptococcus pyogenes strain 1133     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1037684..1048460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1Y72_RS04905 (P1Y72_04905) ychF 1038088..1039203 (-) 1116 WP_011284395.1 redox-regulated ATPase YchF -
  P1Y72_RS04910 (P1Y72_04910) - 1039533..1039730 (-) 198 WP_002981933.1 DUF951 family protein -
  P1Y72_RS04915 (P1Y72_04915) dnaN 1039805..1040941 (-) 1137 WP_002987661.1 DNA polymerase III subunit beta -
  P1Y72_RS04920 (P1Y72_04920) dnaA 1041096..1042451 (-) 1356 WP_002987659.1 chromosomal replication initiator protein DnaA -
  P1Y72_RS04925 (P1Y72_04925) spo0J 1042684..1043460 (-) 777 WP_014407987.1 ParB/RepB/Spo0J family partition protein Regulator
  P1Y72_RS04930 (P1Y72_04930) htrA 1043549..1044772 (-) 1224 WP_002994926.1 trypsin-like peptidase domain-containing protein Regulator
  P1Y72_RS04935 (P1Y72_04935) rlmH 1044984..1045463 (+) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  P1Y72_RS04945 (P1Y72_04945) - 1045858..1046622 (+) 765 Protein_962 IS30 family transposase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29042.85 Da        Isoelectric Point: 10.3100

>NTDB_id=800054 P1Y72_RS04925 WP_014407987.1 1042684..1043460(-) (spo0J) [Streptococcus pyogenes strain 1133]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=800054 P1Y72_RS04925 WP_014407987.1 1042684..1043460(-) (spo0J) [Streptococcus pyogenes strain 1133]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCCACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(9-96)

HTH domain found in ParB protein (HTH_ParB)

(148-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U9TLU5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.755

99.612

0.585