Detailed information NTG0799236

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RBG92_RS14140
• Genome accession: NZ_CP133453
• Coordinates: 2878539..2879522 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain CREC8
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2873539..2884522

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBG92_RS14115 (RBG92_14115)	bcsF	2873700..2873891 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
RBG92_RS14120 (RBG92_14120)	bcsG	2873888..2875567 (+)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
RBG92_RS14125 (RBG92_14125)	ldrD	2875654..2875761 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
RBG92_RS14130 (RBG92_14130)	yhjV	2876237..2877508 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
RBG92_RS14135 (RBG92_14135)	amiE	2877538..2878542 (-)	1005	WP_039023208.1	dipeptide ABC transporter ATP-binding subunit DppF	Regulator
RBG92_RS14140 (RBG92_14140)	amiE	2878539..2879522 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
RBG92_RS14145 (RBG92_14145)	dppC	2879533..2880435 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
RBG92_RS14150 (RBG92_14150)	dppB	2880445..2881464 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
RBG92_RS14160 (RBG92_14160)	dppA	2881772..2883379 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=799236 RBG92_RS14140 WP_001196486.1 2878539..2879522(-) (amiE) [Escherichia coli strain CREC8]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=799236 RBG92_RS14140 WP_001196486.1 2878539..2879522(-) (amiE) [Escherichia coli strain CREC8]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404