Detailed information NTG0796682

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: PYW30_RS02285
• Genome accession: NZ_CP118950
• Coordinates: 458037..459083 (+)
• Length: 348 a.a.
• NCBI ID: WP_232254558.1
• Uniprot ID: -
• Organism: Lactococcus garvieae subsp. garvieae strain DSM 20684
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 453037..464083

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYW30_RS02265	-	453316..454872 (+)	1557	WP_004259192.1	ABC-F family ATP-binding cassette domain-containing protein	-
PYW30_RS02270	-	455037..456212 (+)	1176	WP_004259189.1	SLC13 family permease	-
PYW30_RS02275	-	456270..456920 (+)	651	WP_042217284.1	helix-hairpin-helix domain-containing protein	-
PYW30_RS02280	comEC	456940..458100 (+)	1161	WP_232254510.1	ComEC/Rec2 family competence protein	Machinery gene
PYW30_RS02285	comEC	458037..459083 (+)	1047	WP_232254558.1	ComEC/Rec2 family competence protein	Machinery gene
PYW30_RS02290	-	459238..460014 (+)	777	WP_042217333.1	alpha/beta hydrolase family protein	-
PYW30_RS02295	-	460210..460425 (+)	216	WP_003135074.1	F0F1 ATP synthase subunit C	-
PYW30_RS02300	atpB	460480..461193 (+)	714	WP_004259176.1	F0F1 ATP synthase subunit A	-
PYW30_RS02305	atpF	461207..461713 (+)	507	WP_004259173.1	F0F1 ATP synthase subunit B	-
PYW30_RS02310	-	461728..462255 (+)	528	WP_014024339.1	F0F1 ATP synthase subunit delta	-
PYW30_RS02315	atpA	462321..463829 (+)	1509	WP_004259170.1	F0F1 ATP synthase subunit alpha	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 39605.78 Da
• Isoelectric Point: 9.2487

>NTDB_id=796682 PYW30_RS02285 WP_232254558.1 458037..459083(+) (comEC) [Lactococcus garvieae subsp. garvieae strain DSM 20684]
MFLLSLFGTALTLFNPFFIVLESIVRWVGDLFDQPIVFGKPNLIFLLLLFMLSGLALDFYKKRNWNLSIIIVLFLLFFFV
KNPKHPSITMVDVGQGDSILLQDSWNSQNILIDTGGRLKIRADEQWKEGIYKSNAENTLLPYLRARGVSKIDVLIVTHPD
EDHIGDLESVAQKVPIKNVYVSASALEKKSFAKKLSRLNSQIHIVQEGDKLPIFNSYLWFLTTGVEGKSDNDNSLVTFGE
FYGKKFLFTGDLEEEGEVRLQEEYPHLEVDVLKVGHHGSKTSSKEAFLEAINPKLALISAGKNNRYKHPNQETLQQFAAR
GIKIYRTDQQGAIRLLYKKGSWHIQTVK

Nucleotide

• Length: 1047 bp

>NTDB_id=796682 PYW30_RS02285 WP_232254558.1 458037..459083(+) (comEC) [Lactococcus garvieae subsp. garvieae strain DSM 20684]
ATCTTTCTTCTTTCTTTATTTGGTACTGCTCTCACATTATTTAATCCTTTTTTTATTGTTTTAGAATCAATAGTAAGATG
GGTGGGCGATTTATTTGACCAGCCGATTGTCTTTGGCAAACCCAACCTTATTTTTTTACTTTTACTTTTTATGCTGAGTG
GACTTGCCCTTGATTTTTATAAAAAAAGAAACTGGAACTTGAGCATAATAATTGTTCTTTTCTTGCTTTTTTTCTTTGTT
AAGAATCCTAAACACCCAAGCATTACAATGGTAGATGTGGGACAAGGGGACAGTATTCTTTTACAAGACAGTTGGAACAG
CCAAAACATCCTCATCGATACGGGCGGGAGATTAAAAATAAGAGCTGATGAGCAGTGGAAGGAGGGAATCTATAAGAGCA
ATGCCGAAAATACACTTCTGCCTTATCTGAGAGCGCGTGGCGTGAGTAAGATAGATGTTCTGATTGTGACACATCCAGAT
GAGGATCATATTGGAGACCTGGAGAGTGTAGCTCAGAAAGTACCAATAAAAAATGTTTATGTGTCAGCTTCTGCATTGGA
GAAGAAAAGCTTTGCTAAAAAACTCAGCCGTTTAAACAGTCAGATTCACATTGTGCAGGAGGGGGACAAGCTCCCGATCT
TTAACAGTTATCTCTGGTTTTTAACGACAGGCGTTGAAGGGAAAAGCGACAATGATAATTCTTTAGTGACATTTGGTGAA
TTTTATGGGAAGAAATTTCTTTTTACAGGCGACTTAGAAGAAGAGGGAGAGGTGCGGCTCCAGGAAGAATATCCCCATTT
AGAGGTGGATGTCCTAAAAGTTGGACATCATGGCAGTAAAACTTCTTCAAAGGAAGCTTTTTTAGAAGCAATCAACCCTA
AGCTCGCTCTTATTTCGGCTGGAAAGAATAATCGATATAAACATCCCAATCAAGAAACGCTCCAACAATTCGCTGCACGA
GGTATAAAAATTTATCGTACAGACCAGCAAGGGGCAATCCGTCTCCTTTATAAAAAAGGCAGTTGGCACATTCAAACAGT
AAAGTAG

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (93-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	50.435	99.138	0.5
comEC/celB	Streptococcus mitis SK321	45.326	100	0.46
comEC/celB	Streptococcus mitis NCTC 12261	44.034	100	0.445
comEC/celB	Streptococcus pneumoniae TIGR4	42.735	100	0.431
comEC/celB	Streptococcus pneumoniae D39	42.165	100	0.425
comEC/celB	Streptococcus pneumoniae Rx1	42.165	100	0.425
comEC/celB	Streptococcus pneumoniae R6	42.165	100	0.425
comEC	Bacillus subtilis subsp. subtilis str. 168	35.196	100	0.362