Detailed information NTG0079420

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: OO857_RS23860
• Genome accession: NZ_AP026080
• Coordinates: 4742664..4744184 (-)
• Length: 506 a.a.
• NCBI ID: WP_000058995.1
• Uniprot ID: Q8XAV5
• Organism: Escherichia coli strain F690
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 4737664..4749184

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OO857_RS23850 (CL8F690_45880)	hdfR	4741343..4742182 (-)	840	WP_000379246.1	HTH-type transcriptional regulator HdfR	-
OO857_RS23855 (CL8F690_45890)	maoP	4742301..4742639 (+)	339	WP_000841001.1	macrodomain Ori organization protein MaoP	-
OO857_RS23860 (CL8F690_45900)	comM	4742664..4744184 (-)	1521	WP_000058995.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
OO857_RS23865	ilvL	4744537..4744635 (+)	99	WP_001311244.1	ilv operon leader peptide	-
OO857_RS23870	ilvX	4744722..4744772 (+)	51	WP_100635202.1	peptide IlvX	-
OO857_RS23875 (CL8F690_45910)	ilvG	4744775..4746421 (+)	1647	WP_001012623.1	acetolactate synthase 2 catalytic subunit	-
OO857_RS23880 (CL8F690_45920)	ilvM	4746418..4746681 (+)	264	WP_000983255.1	acetolactate synthase 2 small subunit	-
OO857_RS23885 (CL8F690_45930)	ilvE	4746701..4747630 (+)	930	WP_000208520.1	branched-chain-amino-acid transaminase	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 55217.37 Da
• Isoelectric Point: 7.6190

>NTDB_id=79420 OO857_RS23860 WP_000058995.1 4742664..4744184(-) (comM) [Escherichia coli strain F690]
MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEARDRVRSAIINSGYEYPAKKITINLAPADLPKEGGR
YDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVPGAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLVADHL
QAVCAFLEGKHALERPKPTDAVSRALQHDLSDVVGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNE
EALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIES
GQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPG
ESSTTVKQRVMAARERQFKRQNKLNAWLDSPEIRKFCKLESEDAQWLEETLIHLGLSIRAWQRLLKVARTIADIDQSDII
TRQHLQEAVSYRAIDRLLIHLQKLLT

Nucleotide

• Length: 1521 bp

>NTDB_id=79420 OO857_RS23860 WP_000058995.1 4742664..4744184(-) (comM) [Escherichia coli strain F690]
ATGTCACTGTCAATTGTTCATACCCGCGCAGCCCTGGGAGTAAATGCGCCCCCAATCACTGTTGAGGTACATATCAGTAA
AGGTTTGCCCGGCTTAACGATGGTGGGCTTACCAGAAACAACGGTAAAAGAAGCTCGCGATCGCGTGCGCAGCGCCATTA
TCAATAGCGGATATGAATATCCGGCGAAAAAAATCACCATTAACCTTGCTCCAGCCGATCTACCAAAAGAAGGGGGACGA
TATGATTTACCTATCGCCATTGCGTTGCTGGCGGCCTCAGAACAGCTTACAGCCAATAAGTTAGATGAATATGAATTAGT
CGGAGAACTGGCGCTTACAGGCGCTCTGCGTGGCGTTCCCGGTGCAATCTCCAGTGCAACTGAAGCTATTAAGTCGGGCA
GAAAAATTATCGTCGCGAAAGATAACGAAGATGAAGTGGGGCTAATTAACGGTGAAGGATGCCTGGTAGCCGATCATCTG
CAAGCTGTCTGTGCGTTTCTGGAAGGTAAGCACGCTCTCGAACGCCCGAAACCAACTGATGCAGTATCCCGGGCGCTACA
ACATGATCTCAGTGATGTTGTCGGTCAGGAGCAAGGAAAGCGAGGACTGGAAATTACCGCCGCTGGCGGGCACAACCTTT
TACTGATTGGGCCGCCGGGAACAGGTAAAACAATGCTCGCCAGCCGTATTAATGGTCTTTTGCCAGATTTAAGCAATGAA
GAGGCACTGGAGAGCGCTGCGATATTAAGTCTGGTAAATGCTGAATCAGTACAAAAACAATGGCGGCAGCGCCCGTTCCG
CTCACCTCATCACAGTGCGTCGTTAACGGCGATGGTGGGCGGTGGTGCAATTCCAGGGCCAGGTGAAATTTCGTTGGCGC
ATAACGGCGTGCTTTTTCTTGATGAGCTACCTGAATTTGAACGGCGTACACTGGATGCTTTGCGAGAGCCGATTGAATCC
GGGCAGATCCATCTTTCACGCACACGAGCAAAAATAACCTATCCAGCCCGTTTCCAGCTTGTTGCGGCGATGAATCCCAG
CCCTACCGGACATTATCAGGGAAACCATAACCGCTGCACGCCAGAACAGACATTACGTTATCTCAACCGGCTCTCGGGGC
CCTTTCTCGACCGCTTCGATCTCTCACTGGAGATCCCATTACCACCCCCCGGCATTTTGAGTAAAACGGTAGTGCCGGGA
GAAAGCAGCACCACCGTTAAACAACGTGTAATGGCTGCCAGAGAGCGCCAATTTAAGCGGCAGAATAAGTTGAACGCCTG
GCTGGATAGTCCGGAAATACGCAAATTCTGCAAGCTTGAGAGCGAAGATGCGCAGTGGCTGGAAGAAACGCTGATCCATC
TGGGGTTATCGATTCGTGCCTGGCAGCGGTTATTGAAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATC
ACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGTGCGATTGACCGTTTGCTCATCCATCTGCAAAAACTACTGACATA
A

Domains

Predicted by InterProScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-386)

3D structure

• AlphaFold DB: Q8XAV5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	58.513	100	0.591
comM	Glaesserella parasuis strain SC1401	58.383	100	0.585
comM	Vibrio cholerae strain A1552	58.964	99.209	0.585
comM	Vibrio cholerae O1 biovar El Tor strain E7946	58.964	99.209	0.585
comM	Vibrio campbellii strain DS40M4	57.968	99.209	0.575
comM	Acinetobacter baylyi ADP1	48.795	98.419	0.48
comM	Legionella pneumophila str. Paris	48.193	98.419	0.474
comM	Legionella pneumophila strain ERS1305867	48.193	98.419	0.474
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.269	100	0.443