Detailed information NTG0785963

Bioinformatically predicted

Overview

• Name: pilT
• Type: Machinery gene
• Locus tag: QY054_RS04430
• Genome accession: NZ_CP130602
• Coordinates: 841124..842236 (-)
• Length: 370 a.a.
• NCBI ID: WP_011243005.1
• Uniprot ID: Q31PZ1
• Organism: Synechococcus elongatus PCC 7942 = FACHB-805 strain UTEX 2434
• Function: type IV pilus retraction (predicted from homology) DNA binding and uptake

Genomic Context

Location: 836124..847236

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QY054_RS04410 (QY054_04410)	gor	837069..838409 (-)	1341	WP_011377759.1	glutathione-disulfide reductase	-
QY054_RS04415 (QY054_04415)	-	838508..838939 (-)	432	WP_011243009.1	hypothetical protein	-
QY054_RS04420 (QY054_04420)	-	839103..839813 (-)	711	WP_011377760.1	PHP domain-containing protein	-
QY054_RS04425 (QY054_04425)	-	840267..841082 (-)	816	WP_231621331.1	D-hexose-6-phosphate mutarotase	-
QY054_RS04430 (QY054_04430)	pilT	841124..842236 (-)	1113	WP_011243005.1	type IV pilus twitching motility protein PilT	Machinery gene
QY054_RS04435 (QY054_04435)	uvrA	842340..845351 (-)	3012	WP_011243004.1	excinuclease ABC subunit UvrA	Machinery gene
QY054_RS04440 (QY054_04440)	-	845478..845639 (+)	162	WP_155813866.1	hypothetical protein	-
QY054_RS04445 (QY054_04445)	hemJ	845826..846413 (-)	588	WP_011243003.1	protoporphyrinogen oxidase HemJ	-
QY054_RS04450 (QY054_04450)	-	846483..846683 (-)	201	WP_011243002.1	DUF2811 domain-containing protein	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 40986.34 Da
• Isoelectric Point: 5.6220

>NTDB_id=785963 QY054_RS04430 WP_011243005.1 841124..842236(-) (pilT) [Synechococcus elongatus PCC 7942 = FACHB-805 strain UTEX 2434]
MTAPTIEQLVRKACQVQASDIHLRVGHPPYFRLREQMYPLPNAPAATDSDMASWLNEILTPTQLSRLNETQELDEALFYP
DLIRCRVICFQTLDGVAITLRLIPLQIPSLMDLQLPTVLSALIQRKQGLILVTGPTGSGKSTTLAAMISEMNQSMARHII
TIEDPIEYVFEPVRCLITQREVGRHVHDFSSAVRAALRADPDVILVGEIRDQKTLKAAMHAAQTGHLVLGTLHARNAIAT
IDRLIGLDGMVQSADTRKQFLELLVAVIAQQLITTYSGSRRAVLEVLINTPAIQDYLTRGELDEAYRLMELDTIEGMQTL
NEALITEIEQGRLSIEEALKAAVDPGDLDRRMRIAGISHSFGFSSFKSSA

Nucleotide

• Length: 1113 bp

>NTDB_id=785963 QY054_RS04430 WP_011243005.1 841124..842236(-) (pilT) [Synechococcus elongatus PCC 7942 = FACHB-805 strain UTEX 2434]
ATGACAGCGCCGACCATTGAACAACTGGTGCGTAAGGCCTGCCAAGTGCAAGCATCTGATATTCACCTGCGAGTGGGGCA
CCCACCCTACTTTCGCTTGCGGGAACAGATGTATCCGCTCCCCAATGCACCAGCTGCGACCGACAGCGATATGGCGAGCT
GGCTTAATGAAATCCTGACACCAACGCAACTGAGTCGTCTCAATGAAACCCAAGAGCTAGACGAGGCCCTGTTTTACCCT
GACCTGATTCGCTGTCGGGTAATCTGCTTTCAAACGCTGGATGGCGTCGCCATTACCCTGCGGCTCATTCCTCTGCAGAT
TCCCAGTCTGATGGATCTGCAACTGCCCACAGTTTTATCCGCCCTGATTCAACGCAAACAGGGATTGATTTTGGTGACGG
GGCCAACGGGGTCTGGCAAGTCCACGACGCTGGCCGCCATGATCAGTGAAATGAATCAGTCCATGGCTCGGCACATCATC
ACGATCGAAGATCCGATCGAATATGTCTTTGAGCCAGTGCGATGCCTGATCACCCAGCGAGAGGTGGGGCGGCATGTCCA
TGACTTTTCATCGGCTGTACGGGCAGCGCTGCGAGCCGATCCCGATGTCATCCTCGTGGGAGAAATCCGCGATCAAAAAA
CCCTCAAAGCAGCGATGCATGCGGCGCAAACCGGCCACCTAGTGCTCGGGACGCTCCATGCTCGCAATGCGATCGCCACA
ATCGATCGCCTGATTGGTCTGGACGGCATGGTCCAGAGCGCCGATACACGAAAGCAATTTCTCGAACTATTGGTTGCGGT
GATTGCCCAACAGCTAATCACGACCTATTCGGGGAGTCGGCGTGCTGTTTTAGAGGTGCTCATCAATACACCTGCCATTC
AGGACTATCTCACCCGAGGTGAACTAGACGAGGCTTACCGGTTAATGGAGCTCGATACGATTGAGGGGATGCAGACCTTG
AATGAGGCACTGATCACTGAGATTGAGCAAGGGCGACTCAGTATTGAAGAAGCCCTCAAAGCTGCTGTCGACCCCGGAGA
TCTCGATCGCCGAATGCGGATTGCTGGAATCAGCCACTCCTTTGGATTCTCCAGTTTCAAATCCAGCGCCTGA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (9-273)

3D structure

• AlphaFold DB: Q31PZ1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	41.329	93.514	0.386
pilT	Vibrio cholerae O1 biovar El Tor strain E7946	42.169	89.73	0.378
pilT	Vibrio cholerae strain A1552	42.169	89.73	0.378
pilU	Pseudomonas stutzeri DSM 10701	39.886	94.865	0.378
pilT	Acinetobacter baylyi ADP1	40	91.892	0.368