Detailed information NTG0783449

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: MGCS35823_RS05960
• Genome accession: NZ_CP117289
• Coordinates: 1150666..1151340 (-)
• Length: 224 a.a.
• NCBI ID: WP_014612304.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain MGCS35823
• Function: repress competence development; post-transcriptional repression of CSP production (predicted from homology) Competence regulation

Genomic Context

Location: 1145666..1156340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MGCS35823_RS05935 (MGCS35823_02406)	-	1145852..1147129 (-)	1278	WP_015017041.1	pyrimidine-nucleoside phosphorylase	-
MGCS35823_RS05940 (MGCS35823_02408)	-	1147116..1147715 (-)	600	WP_015057597.1	class I SAM-dependent methyltransferase	-
MGCS35823_RS05945 (MGCS35823_02410)	coaA	1147983..1148903 (+)	921	WP_084916836.1	type I pantothenate kinase	-
MGCS35823_RS05950 (MGCS35823_02412)	rpsT	1148957..1149205 (+)	249	WP_009881183.1	30S ribosomal protein S20	-
MGCS35823_RS05955 (MGCS35823_02414)	ciaH	1149363..1150673 (-)	1311	WP_014612303.1	HAMP domain-containing sensor histidine kinase	Regulator
MGCS35823_RS05960 (MGCS35823_02416)	ciaR	1150666..1151340 (-)	675	WP_014612304.1	response regulator transcription factor	Regulator
MGCS35823_RS05965 (MGCS35823_02418)	-	1151544..1154081 (-)	2538	WP_084916834.1	M1 family metallopeptidase	-
MGCS35823_RS05970 (MGCS35823_02420)	phoU	1154282..1154935 (-)	654	WP_003057760.1	phosphate signaling complex protein PhoU	-
MGCS35823_RS05975 (MGCS35823_02422)	pstB	1155013..1155771 (-)	759	WP_003057749.1	phosphate ABC transporter ATP-binding protein PstB	-

Sequence

Protein

• Length: 224 a.a.
• Molecular weight: 25592.57 Da
• Isoelectric Point: 4.4128

>NTDB_id=783449 MGCS35823_RS05960 WP_014612304.1 1150666..1151340(-) (ciaR) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35823]
MIKLLLVEDDLSLSNSIFDFLDDFADVTQVFDGDEGLYEAESGIYDLILLDLMLPEKNGFQVLKELREKDIKIPVLIMTA
KESLDDKGQGFELGADDYLTKPFYLEELKMRIQALLKRTGKFTDKNLAFGNVVVDLGQKEVQVDGRPIELLGKEFDLLVY
LLQNQNVILPKTQIFDRLWGFDSDTTISVVEVYVSKIRKKLKGTDFVDKLQTLRSVGYILKSHE

Nucleotide

• Length: 675 bp

>NTDB_id=783449 MGCS35823_RS05960 WP_014612304.1 1150666..1151340(-) (ciaR) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS35823]
ATGATCAAACTATTATTAGTAGAAGATGACTTAAGTTTATCCAATTCCATTTTCGATTTTTTGGATGATTTTGCTGATGT
CACACAAGTTTTTGATGGCGATGAAGGCTTATATGAAGCCGAAAGTGGCATTTACGATTTGATTTTACTTGACCTTATGT
TGCCAGAAAAAAATGGCTTCCAAGTCTTGAAAGAATTGCGAGAAAAAGATATTAAAATTCCTGTGTTGATTATGACAGCC
AAAGAAAGCCTAGATGATAAGGGACAGGGCTTTGAATTAGGAGCAGATGATTACCTCACTAAGCCTTTTTACCTGGAGGA
ACTCAAGATGCGAATTCAAGCCCTGTTAAAACGTACAGGGAAATTCACGGATAAAAATCTAGCCTTTGGGAATGTCGTAG
TGGATTTAGGACAAAAAGAAGTTCAAGTGGATGGCCGGCCGATAGAACTATTAGGTAAAGAGTTTGATTTGTTGGTCTAC
CTGTTACAAAATCAGAATGTTATTTTACCTAAAACACAAATTTTTGATCGCTTATGGGGTTTTGATAGCGATACGACCAT
TTCAGTAGTTGAAGTTTACGTTTCTAAAATTAGAAAAAAACTGAAAGGTACAGATTTTGTGGACAAACTGCAGACATTGA
GAAGCGTGGGGTATATTCTAAAAAGCCATGAATAA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (145-220)

• Response regulator receiver domain (Response_reg) (5-112)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus pneumoniae Rx1	84.163	98.661	0.83
ciaR	Streptococcus pneumoniae D39	84.163	98.661	0.83
ciaR	Streptococcus pneumoniae R6	84.163	98.661	0.83
ciaR	Streptococcus pneumoniae TIGR4	84.163	98.661	0.83
ciaR	Streptococcus mutans UA159	83.71	98.661	0.826
covR	Lactococcus lactis subsp. lactis strain DGCC12653	38.326	100	0.388
vicR	Streptococcus mutans UA159	35.443	100	0.375