Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | LOY12_RS03790 | Genome accession | NZ_CP116909 |
| Coordinates | 744436..744906 (+) | Length | 156 a.a. |
| NCBI ID | WP_000610649.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain AATYW | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 739436..749906
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOY12_RS03750 (LOY12_003750) | - | 739453..739773 (+) | 321 | WP_001120936.1 | DUF771 domain-containing protein | - |
| LOY12_RS03755 (LOY12_003755) | - | 739770..739931 (+) | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| LOY12_RS03760 (LOY12_003760) | - | 740024..740326 (+) | 303 | WP_016170555.1 | DUF2482 family protein | - |
| LOY12_RS03765 (LOY12_003765) | - | 740331..740591 (+) | 261 | WP_000291504.1 | DUF1108 family protein | - |
| LOY12_RS03770 (LOY12_003770) | - | 740600..740863 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| LOY12_RS03775 (LOY12_003775) | - | 740872..742815 (+) | 1944 | WP_023604913.1 | AAA family ATPase | - |
| LOY12_RS03780 (LOY12_003780) | - | 742817..743737 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| LOY12_RS03785 (LOY12_003785) | - | 743818..744435 (+) | 618 | WP_077517322.1 | MBL fold metallo-hydrolase | - |
| LOY12_RS03790 (LOY12_003790) | ssbA | 744436..744906 (+) | 471 | WP_000610649.1 | single-stranded DNA-binding protein | Machinery gene |
| LOY12_RS13825 (LOY12_003795) | - | 744936..745238 (+) | 303 | WP_089430320.1 | hypothetical protein | - |
| LOY12_RS13830 (LOY12_003800) | - | 745254..745805 (+) | 552 | WP_089430321.1 | DnaD domain protein | - |
| LOY12_RS03805 (LOY12_003805) | - | 745812..746030 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| LOY12_RS03810 (LOY12_003810) | - | 746039..746444 (+) | 406 | Protein_749 | RusA family crossover junction endodeoxyribonuclease | - |
| LOY12_RS03815 (LOY12_003815) | - | 746457..746825 (+) | 369 | WP_023604910.1 | SA1788 family PVL leukocidin-associated protein | - |
| LOY12_RS03820 (LOY12_003820) | - | 746829..747071 (+) | 243 | WP_023604909.1 | phi PVL orf 51-like protein | - |
| LOY12_RS03825 (LOY12_003825) | - | 747080..747430 (+) | 351 | WP_025176279.1 | hypothetical protein | - |
| LOY12_RS03830 (LOY12_003830) | - | 747423..747674 (+) | 252 | WP_001065046.1 | DUF1024 family protein | - |
| LOY12_RS03835 (LOY12_003835) | - | 747664..747837 (+) | 174 | WP_000028424.1 | hypothetical protein | - |
| LOY12_RS03840 (LOY12_003840) | - | 747838..747990 (+) | 153 | WP_016170781.1 | hypothetical protein | - |
| LOY12_RS03845 (LOY12_003845) | - | 748120..748281 (+) | 162 | WP_000889682.1 | hypothetical protein | - |
| LOY12_RS03850 (LOY12_003850) | - | 748296..748829 (+) | 534 | WP_023604907.1 | dUTPase | - |
| LOY12_RS03855 (LOY12_003855) | - | 748866..749072 (+) | 207 | WP_089430322.1 | DUF1381 domain-containing protein | - |
| LOY12_RS03860 (LOY12_003860) | - | 749069..749272 (+) | 204 | WP_000141180.1 | hypothetical protein | - |
| LOY12_RS03865 (LOY12_003865) | - | 749265..749501 (+) | 237 | WP_000608275.1 | DUF7366 family protein | - |
| LOY12_RS03870 (LOY12_003870) | - | 749494..749880 (+) | 387 | WP_000592202.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17716.59 Da Isoelectric Point: 4.9816
>NTDB_id=781092 LOY12_RS03790 WP_000610649.1 744436..744906(+) (ssbA) [Staphylococcus aureus strain AATYW]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINVIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNTNDNQQDLYKQQAQQSRGQSQYPYNKPVKDNPFANANDPIEIDDDDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINVIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNTNDNQQDLYKQQAQQSRGQSQYPYNKPVKDNPFANANDPIEIDDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=781092 LOY12_RS03790 WP_000610649.1 744436..744906(+) (ssbA) [Staphylococcus aureus strain AATYW]
ATGATAAATAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCGGTTAACCGTACATTTACGAATGCACAAGGCGAGCGCGAGGCAGATTTTATTAATGTCATTGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAGAA
CACAAATGATAATCAACAAGATTTATACAAACAACAAGCGCAACAATCACGTGGACAGTCTCAATATCCATATAACAAAC
CAGTAAAAGATAATCCGTTCGCAAATGCGAATGATCCTATTGAAATAGATGACGATGATTTACCATTCTAA
ATGATAAATAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCGGTTAACCGTACATTTACGAATGCACAAGGCGAGCGCGAGGCAGATTTTATTAATGTCATTGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAGAA
CACAAATGATAATCAACAAGATTTATACAAACAACAAGCGCAACAATCACGTGGACAGTCTCAATATCCATATAACAAAC
CAGTAAAAGATAATCCGTTCGCAAATGCGAATGATCCTATTGAAATAGATGACGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
53.529 |
100 |
0.583 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Vibrio cholerae strain A1552 |
33.14 |
100 |
0.365 |
| ssb | Neisseria meningitidis MC58 |
32.948 |
100 |
0.365 |
| ssb | Neisseria gonorrhoeae MS11 |
32.948 |
100 |
0.365 |