Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | H7R81_RS03875 | Genome accession | NZ_AP022290 |
| Coordinates | 805758..806078 (-) | Length | 106 a.a. |
| NCBI ID | WP_064338737.1 | Uniprot ID | - |
| Organism | Aeromonas veronii strain WP9-W18-ESBL-04 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 800758..811078
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R81_RS03855 (WP9W18E04_07330) | - | 801096..801794 (-) | 699 | WP_108588458.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| H7R81_RS03860 (WP9W18E04_07340) | - | 802093..803064 (+) | 972 | WP_042059874.1 | response regulator | - |
| H7R81_RS03865 (WP9W18E04_07350) | - | 803140..804537 (-) | 1398 | WP_182970436.1 | peptide MFS transporter | - |
| H7R81_RS03870 (WP9W18E04_07360) | galU | 804751..805662 (-) | 912 | WP_075113688.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| H7R81_RS03875 (WP9W18E04_07370) | comEA/comE1 | 805758..806078 (-) | 321 | WP_064338737.1 | ComEA family DNA-binding protein | Machinery gene |
| H7R81_RS03880 (WP9W18E04_07380) | pta | 806458..808638 (-) | 2181 | WP_042059882.1 | phosphate acetyltransferase | - |
| H7R81_RS03885 (WP9W18E04_07390) | - | 808695..809897 (-) | 1203 | WP_042059883.1 | acetate kinase | - |
| H7R81_RS03890 (WP9W18E04_07400) | yfbV | 810202..810642 (+) | 441 | WP_005339116.1 | terminus macrodomain insulation protein YfbV | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11300.30 Da Isoelectric Point: 9.6564
>NTDB_id=77554 H7R81_RS03875 WP_064338737.1 805758..806078(-) (comEA/comE1) [Aeromonas veronii strain WP9-W18-ESBL-04]
MLMKKLSAVMLLACLPLFSQPVLATDKVAPKQTTTAAVAKEDGKLNINTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
MLMKKLSAVMLLACLPLFSQPVLATDKVAPKQTTTAAVAKEDGKLNINTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=77554 H7R81_RS03875 WP_064338737.1 805758..806078(-) (comEA/comE1) [Aeromonas veronii strain WP9-W18-ESBL-04]
ATGCTGATGAAGAAACTCTCTGCAGTCATGCTGCTGGCCTGCTTGCCCCTGTTCAGCCAACCCGTGCTGGCCACAGATAA
GGTAGCGCCCAAGCAAACAACCACGGCCGCGGTCGCCAAGGAGGACGGCAAACTGAATATCAATACCGCCACCCTTGCCG
AACTCACCAGCCTGAAAGGGATTGGCGACAAGAAGGCACAGGCCATCGTCGACTATCGGGAAAAACAGGGAAAGTTCACC
TCGGTCGATCAGCTGGCGGATGTCAACGGCATTGGTCCGGCCACGCTGGAAGCCAACAGGGATATGATAATAGTCAAATA
A
ATGCTGATGAAGAAACTCTCTGCAGTCATGCTGCTGGCCTGCTTGCCCCTGTTCAGCCAACCCGTGCTGGCCACAGATAA
GGTAGCGCCCAAGCAAACAACCACGGCCGCGGTCGCCAAGGAGGACGGCAAACTGAATATCAATACCGCCACCCTTGCCG
AACTCACCAGCCTGAAAGGGATTGGCGACAAGAAGGCACAGGCCATCGTCGACTATCGGGAAAAACAGGGAAAGTTCACC
TCGGTCGATCAGCTGGCGGATGTCAACGGCATTGGTCCGGCCACGCTGGAAGCCAACAGGGATATGATAATAGTCAAATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
48.673 |
100 |
0.519 |
| comEA | Vibrio cholerae C6706 |
46.667 |
99.057 |
0.462 |
| comEA | Vibrio cholerae strain A1552 |
46.667 |
99.057 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.299 |
91.509 |
0.396 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
66.129 |
58.491 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
39.394 |
93.396 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
39.394 |
93.396 |
0.368 |