Detailed information NTG0772889

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: PF515_RS09965
• Genome accession: NZ_CP115626
• Coordinates: 2096426..2097127 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2022CK-00185
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2091426..2102127

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PF515_RS09930 (PF515_09930)	kdsB	2091949..2092710 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PF515_RS09935 (PF515_09935)	-	2092722..2093702 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
PF515_RS09940 (PF515_09940)	-	2093714..2094055 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
PF515_RS09945 (PF515_09945)	-	2094073..2094846 (+)	774	WP_000497298.1	TatD family hydrolase	-
PF515_RS09950 (PF515_09950)	-	2094884..2095492 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
PF515_RS09955 (PF515_09955)	-	2095502..2096056 (+)	555	WP_000841373.1	type II secretion system protein	-
PF515_RS09960 (PF515_09960)	xcpV	2096046..2096426 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
PF515_RS09965 (PF515_09965)	xcpW	2096426..2097127 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
PF515_RS09970 (PF515_09970)	gspK	2097127..2098086 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
PF515_RS09975 (PF515_09975)	-	2098317..2098913 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
PF515_RS09980 (PF515_09980)	ung	2098964..2099677 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
PF515_RS09985 (PF515_09985)	-	2099674..2100798 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
PF515_RS09990 (PF515_09990)	tadA	2100805..2101308 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
PF515_RS09995 (PF515_09995)	-	2101378..2101821 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=772889 PF515_RS09965 WP_000594589.1 2096426..2097127(+) (xcpW) [Acinetobacter baumannii strain 2022CK-00185]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=772889 PF515_RS09965 WP_000594589.1 2096426..2097127(+) (xcpW) [Acinetobacter baumannii strain 2022CK-00185]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996