Detailed information NTG0772893

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: QRS93_RS00690
• Genome accession: NZ_CP127842
• Coordinates: 116717..117157 (+)
• Length: 146 a.a.
• NCBI ID: WP_003061780.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 111717..122157

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRS93_RS00660 (QRS93_00660)	-	113398..113763 (+)	366	WP_003055257.1	DUF1033 family protein	-
QRS93_RS00665 (QRS93_00665)	comGA/cglA	113844..114785 (+)	942	WP_015016543.1	competence type IV pilus ATPase ComGA	Machinery gene
QRS93_RS00670 (QRS93_00670)	comGB	114721..115752 (+)	1032	WP_042357807.1	competence type IV pilus assembly protein ComGB	Machinery gene
QRS93_RS00675 (QRS93_00675)	comGC	115754..116080 (+)	327	WP_003055259.1	competence type IV pilus major pilin ComGC	Machinery gene
QRS93_RS00680 (QRS93_00680)	comGD	116055..116483 (+)	429	WP_041788719.1	competence type IV pilus minor pilin ComGD	Machinery gene
QRS93_RS00685 (QRS93_00685)	comGE	116491..116736 (+)	246	WP_003058569.1	competence type IV pilus minor pilin ComGE	Machinery gene
QRS93_RS00690 (QRS93_00690)	comGF	116717..117157 (+)	441	WP_003061780.1	competence type IV pilus minor pilin ComGF	Machinery gene
QRS93_RS00695 (QRS93_00695)	comGG	117186..117509 (+)	324	WP_227985720.1	competence type IV pilus minor pilin ComGG	-
QRS93_RS00700 (QRS93_00700)	comGH	117572..118525 (+)	954	WP_003060701.1	class I SAM-dependent methyltransferase	Machinery gene
QRS93_RS00705 (QRS93_00705)	-	118584..119780 (+)	1197	WP_003058485.1	acetate kinase	-
QRS93_RS00710 (QRS93_00710)	-	120086..120292 (+)	207	WP_003058508.1	helix-turn-helix transcriptional regulator	-
QRS93_RS00715 (QRS93_00715)	-	120395..121075 (+)	681	WP_003060329.1	type II CAAX endopeptidase family protein	-
QRS93_RS00720 (QRS93_00720)	-	121093..121530 (+)	438	WP_012766452.1	hypothetical protein	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 16969.55 Da
• Isoelectric Point: 10.6305

>NTDB_id=772893 QRS93_RS00690 WP_003061780.1 116717..117157(+) (comGF) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37]
MKKRTGRVQAFTFLEALIALLVISGSLLVYQGLTKTLLSHSRYLTKNDQDHWLLFSQQLREELSGARFHKVENNKLYIEK
GKKKLVLGQFKSHDFRKSAGNGQGYQPMLFGLSHSHIQAEQSRIRITLHWKSGLERTFYYAFQDQP

Nucleotide

• Length: 441 bp

>NTDB_id=772893 QRS93_RS00690 WP_003061780.1 116717..117157(+) (comGF) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37]
TTGAAAAAAAGGACAGGTAGGGTCCAAGCATTTACTTTTTTAGAGGCTTTAATTGCCTTACTGGTGATATCAGGTTCTCT
TCTAGTGTATCAAGGATTGACCAAAACACTCCTTAGCCACAGTCGCTACCTTACCAAAAATGATCAAGACCATTGGCTTT
TGTTCTCCCAGCAGTTACGAGAAGAGTTAAGTGGAGCGCGATTTCACAAAGTAGAGAACAATAAATTATATATCGAAAAA
GGCAAGAAAAAACTAGTTTTAGGACAATTTAAAAGCCATGACTTTCGAAAATCGGCAGGCAATGGACAAGGTTATCAACC
CATGCTGTTTGGCCTGTCTCATAGTCATATACAAGCAGAGCAGTCTCGTATTCGTATTACCCTTCACTGGAAAAGTGGAC
TAGAAAGGACCTTCTACTATGCGTTTCAAGACCAACCTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (40-135)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Streptococcus mutans UA159	48.921	95.205	0.466
comGF	Streptococcus mutans UA140	48.201	95.205	0.459
comGF	Lactococcus lactis subsp. cremoris KW2	46.377	94.521	0.438
comGF/cglF	Streptococcus mitis NCTC 12261	43.796	93.836	0.411
comGF/cglF	Streptococcus pneumoniae R6	43.796	93.836	0.411
comGF/cglF	Streptococcus pneumoniae TIGR4	43.796	93.836	0.411
comGF/cglF	Streptococcus pneumoniae D39	43.796	93.836	0.411
comGF/cglF	Streptococcus mitis SK321	43.796	93.836	0.411
comGF/cglF	Streptococcus pneumoniae Rx1	43.796	93.836	0.411