Detailed information NTG0077044

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: LPH31_RS22580
• Genome accession: NZ_AP025220
• Coordinates: 4666967..4668487 (+)
• Length: 506 a.a.
• NCBI ID: WP_072778410.1
• Uniprot ID: -
• Organism: Escherichia coli strain 2017.11.01CC
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 4661967..4673487

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPH31_RS22555 (VEGS20_A43530)	ilvE	4663521..4664450 (-)	930	WP_000208520.1	branched-chain-amino-acid transaminase	-
LPH31_RS22560 (VEGS20_A43540)	ilvM	4664470..4664733 (-)	264	WP_000983255.1	acetolactate synthase 2 small subunit	-
LPH31_RS22565 (VEGS20_A43550)	ilvG	4664730..4666376 (-)	1647	WP_001012608.1	acetolactate synthase 2 catalytic subunit	-
LPH31_RS22570	ilvX	4666379..4666429 (-)	51	WP_001387183.1	peptide IlvX	-
LPH31_RS22575	ilvL	4666516..4666614 (-)	99	WP_001311244.1	ilv operon leader peptide	-
LPH31_RS22580 (VEGS20_A43560)	comM	4666967..4668487 (+)	1521	WP_072778410.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
LPH31_RS22585 (VEGS20_A43570)	maoP	4668512..4668850 (-)	339	WP_000841001.1	macrodomain Ori organization protein MaoP	-
LPH31_RS22590 (VEGS20_A43580)	hdfR	4668969..4669808 (+)	840	WP_000379245.1	HTH-type transcriptional regulator HdfR	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 55127.31 Da
• Isoelectric Point: 7.4104

>NTDB_id=77044 LPH31_RS22580 WP_072778410.1 4666967..4668487(+) (comM) [Escherichia coli strain 2017.11.01CC]
MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEAHDRVRSAIINSGYEYPAKKITINLAPADLPKEGGR
YDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVPGAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHL
QAVCAFLEGKHALERPKPTDAVSRALQHDLSDVIGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNE
EALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIES
GQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPG
ESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDII
TRQHLQEAVSYRAIDRLLIHLQKLLT

Nucleotide

• Length: 1521 bp

>NTDB_id=77044 LPH31_RS22580 WP_072778410.1 4666967..4668487(+) (comM) [Escherichia coli strain 2017.11.01CC]
ATGTCACTGTCAATTGTTCATACCCGCGCAGCCCTGGGAGTAAATGCGCCCCCGATCACTGTTGAGGTACATATCAGTAA
AGGTCTACCCGGCTTAACGATGGTGGGCTTACCAGAAACAACGGTAAAAGAAGCTCACGATCGCGTGCGCAGCGCCATTA
TCAATAGCGGATATGAATATCCGGCGAAAAAAATCACCATCAACCTGGCTCCAGCTGATCTGCCAAAAGAAGGGGGACGA
TATGATTTACCTATCGCCATTGCGTTGCTGGCGGCCTCAGAACAGCTTACAGCCAATAAGTTAGATGAATATGAATTAGT
CGGAGAACTGGCGCTTACAGGCGCTCTGCGTGGCGTTCCCGGCGCAATCTCCAGTGCAACTGAAGCTATTAAGTCGGGCA
GAAAAATTATCGTCGCGAAAGATAACGAAGATGAAGTGGGGCTAATTAACGGTGAAGGATGCCTGATAGCCGATCATCTG
CAAGCTGTCTGTGCGTTTCTGGAAGGTAAGCACGCTCTCGAACGCCCGAAACCAACTGATGCAGTATCCCGGGCGCTACA
ACATGATCTCAGTGATGTTATCGGTCAGGAACAAGGAAAGCGAGGACTGGAAATTACCGCTGCTGGCGGGCACAACCTTT
TACTGATTGGGCCGCCGGGAACAGGTAAAACAATGCTCGCCAGCCGTATTAATGGCCTGTTGCCAGATTTAAGCAATGAA
GAGGCACTGGAGAGTGCTGCGATATTAAGTCTGGTAAATGCTGAATCAGTACAAAAACAATGGCGGCAGCGCCCGTTCCG
CTCACCTCATCACAGTGCATCGTTAACTGCGATGGTAGGCGGTGGCGCAATTCCAGGGCCCGGTGAAATTTCGCTGGCGC
ATAACGGCGTGCTTTTTCTTGATGAGCTACCTGAATTTGAACGGCGTACACTGGATGCCTTGCGAGAGCCGATTGAATCC
GGGCAGATCCATCTTTCACGCACACGAGCAAAAATAACCTATCCAGCCCGTTTCCAGCTTGTTGCGGCGATGAATCCCAG
CCCTACCGGACATTATCAGGGAAACCATAACCGCTGCACGCCAGAACAGACATTACGTTATCTCAACCGGCTCTCGGGGC
CCTTTCTCGACCGCTTCGATCTCTCACTGGAGATCCCATTACCACCCCCCGGCATTTTGAGTAAAACGGTAGTGCCGGGA
GAAAGCAGCGCCACCGTTAAACAACGCGTAATGGCCGCCAGAGAGCGCCAATTTAAGCGGCAGAATAAACTGAATGCCTG
GCTGGATAGTCCGGAAATACGCCAATTCTGCAAACTTGAGAGCGAAGATGCAATGTGGTTGGAAGGAACACTGATCCATC
TGGGGTTATCGATTCGTGCCTGGCAGCGGTTATTGAAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATC
ACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATA
A

Domains

Predicted by InterProScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	58.904	100	0.595
comM	Vibrio cholerae O1 biovar El Tor strain E7946	59.363	99.209	0.589
comM	Vibrio cholerae strain A1552	59.363	99.209	0.589
comM	Glaesserella parasuis strain SC1401	58.777	100	0.589
comM	Vibrio campbellii strain DS40M4	58.367	99.209	0.579
comM	Acinetobacter baylyi ADP1	48.996	98.419	0.482
comM	Legionella pneumophila str. Paris	47.992	98.419	0.472
comM	Legionella pneumophila strain ERS1305867	47.992	98.419	0.472
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.269	100	0.443