Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   O6R09_RS09195 Genome accession   NZ_CP114883
Coordinates   1820583..1821809 (+) Length   408 a.a.
NCBI ID   WP_340647695.1    Uniprot ID   -
Organism   Streptococcus alactolyticus strain LGM     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1815583..1826809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O6R09_RS09170 (O6R09_09170) - 1816733..1819324 (+) 2592 WP_269725647.1 YfhO family protein -
  O6R09_RS09190 (O6R09_09190) rlmH 1819878..1820357 (-) 480 WP_154455338.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  O6R09_RS09195 (O6R09_09195) htrA 1820583..1821809 (+) 1227 WP_340647695.1 S1C family serine protease Regulator
  O6R09_RS09200 (O6R09_09200) spo0J 1821885..1822667 (+) 783 WP_154455339.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 408 a.a.        Molecular weight: 42373.26 Da        Isoelectric Point: 4.4855

>NTDB_id=767354 O6R09_RS09195 WP_340647695.1 1820583..1821809(+) (htrA) [Streptococcus alactolyticus strain LGM]
MPKGRFKNWLKPLAIVLVSFVAGILGAILVLNRAGISLSNVSGSGAKTTTSSVTYTNSTDVTKAVEKVQGAVVSVINYRS
DSSSGNDIYSQIFGNDNSINQSNNSGDLSVYSEGSGVIYKKDGDSAYVVTNNHVVDGAEQIEIMLADGKKVVGELVGADT
YSDIAVVKISSKDVTTVAEFADSNKITVGETAIAIGSPLGTEYANSVTQGIVSSLSRTVTMTNDNGETISTNAIQTDAAI
NPGNSGGALINIEGQVIGINSSKISSTSSSGESVEGMGFAIPSNDVVKIINQLEENGKVIRPALGISMVNLSDLSTNAIA
QLNIPKSITNGVVVASVQSGMPAEGKLQKYDVITEVDGQEVTSTSDLQSVLYGHSVGDSVKVTFYRGTDKKTVTIDLSKT
TQDLSSTN

Nucleotide


Download         Length: 1227 bp        

>NTDB_id=767354 O6R09_RS09195 WP_340647695.1 1820583..1821809(+) (htrA) [Streptococcus alactolyticus strain LGM]
CTGCCTAAAGGGCGTTTCAAAAATTGGCTAAAACCATTAGCTATTGTGCTTGTTAGCTTTGTTGCTGGGATTTTAGGTGC
TATTTTGGTATTAAATCGTGCGGGAATCTCCCTATCTAACGTGAGTGGTTCAGGTGCCAAAACAACTACGAGTAGCGTGA
CTTATACCAATTCGACTGATGTCACAAAAGCTGTGGAAAAAGTTCAAGGAGCGGTCGTTTCCGTAATCAATTACCGTTCA
GATTCTTCTTCAGGAAATGACATTTACAGTCAGATTTTTGGTAATGACAATTCGATTAACCAGTCAAATAACAGCGGTGA
TTTGTCAGTTTACAGCGAAGGTTCAGGGGTTATTTACAAAAAAGATGGTGACTCAGCCTATGTTGTAACCAATAATCACG
TGGTCGATGGCGCAGAACAAATTGAAATCATGCTAGCCGACGGTAAAAAAGTTGTCGGTGAATTGGTCGGAGCTGACACT
TACTCTGACATTGCTGTCGTGAAAATTTCGTCTAAAGATGTCACAACTGTTGCCGAATTTGCCGATTCTAATAAAATCAC
TGTCGGTGAAACAGCCATTGCTATTGGTAGCCCACTTGGAACAGAATACGCAAACTCAGTAACGCAAGGTATCGTTTCTA
GTCTAAGCCGTACTGTAACAATGACTAATGACAATGGTGAAACCATTTCAACCAATGCCATTCAAACAGATGCTGCCATT
AACCCAGGAAACTCTGGTGGTGCGCTAATCAATATTGAAGGGCAAGTCATCGGTATTAACTCTAGCAAGATTTCATCAAC
TTCAAGTTCTGGTGAGTCGGTTGAAGGTATGGGCTTTGCTATTCCGTCAAATGATGTGGTGAAAATCATCAATCAATTGG
AGGAAAACGGAAAAGTTATCCGCCCTGCGCTTGGTATTTCAATGGTTAACTTGTCTGATTTGTCAACCAATGCTATTGCA
CAACTTAATATTCCAAAAAGTATCACAAACGGTGTGGTTGTTGCCTCAGTTCAATCTGGCATGCCTGCTGAAGGAAAACT
TCAAAAATATGATGTCATCACAGAAGTCGATGGTCAAGAAGTGACATCAACCTCTGACCTACAAAGCGTTCTTTACGGCC
ATTCTGTTGGAGACTCTGTCAAAGTAACCTTCTACCGTGGTACAGACAAGAAAACTGTGACAATTGATTTAAGTAAAACA
ACACAAGACTTATCAAGTACAAACTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(302-397)

Trypsin-like peptidase domain (Trypsin_2)

(114-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

64.677

98.529

0.637
  htrA Streptococcus gordonii str. Challis substr. CH1

57.357

98.284

0.564
  htrA Streptococcus pneumoniae D39

56.683

99.02

0.561
  htrA Streptococcus pneumoniae TIGR4

56.683

99.02

0.561
  htrA Streptococcus mitis NCTC 12261

56.683

99.02

0.561
  htrA Streptococcus pneumoniae R6

56.683

99.02

0.561
  htrA Streptococcus pneumoniae Rx1

56.683

99.02

0.561