Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   O6R09_RS09200 Genome accession   NZ_CP114883
Coordinates   1821885..1822667 (+) Length   260 a.a.
NCBI ID   WP_154455339.1    Uniprot ID   -
Organism   Streptococcus alactolyticus strain LGM     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1816885..1827667
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O6R09_RS09190 (O6R09_09190) rlmH 1819878..1820357 (-) 480 WP_154455338.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  O6R09_RS09195 (O6R09_09195) htrA 1820583..1821809 (+) 1227 WP_340647695.1 S1C family serine protease Regulator
  O6R09_RS09200 (O6R09_09200) spo0J 1821885..1822667 (+) 783 WP_154455339.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29717.46 Da        Isoelectric Point: 9.8945

>NTDB_id=767355 O6R09_RS09200 WP_154455339.1 1821885..1822667(+) (spo0J) [Streptococcus alactolyticus strain LGM]
MKEKLQVIPIEDISPNPYQPRLDFKPEELEELAQSIKLNGLIQPIIVRQSSVFGYELIAGERRLKASKLAGLSEIPAIIK
TISDQKSMQLAIIENLQRSDLNPIEEAKAYKQLLEKNQMTHEELAQFMGKSRPYITNCLRLLNLPPSLSRAVEEGSLSQG
HARLLLTLKSKEEQEQWYQRILSQDISVRKLEQLLKPKPSAPKKKAKKDIFKKHHEDILSQSLGLPVSISFANSKSTQKG
EVVLHFQSEEDFNRIINKFK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=767355 O6R09_RS09200 WP_154455339.1 1821885..1822667(+) (spo0J) [Streptococcus alactolyticus strain LGM]
ATGAAAGAGAAACTACAAGTTATACCCATTGAAGATATTTCGCCCAATCCCTACCAACCTAGGCTGGATTTTAAACCAGA
AGAACTGGAAGAATTAGCCCAATCAATCAAGTTAAACGGGCTTATTCAGCCGATTATCGTCCGACAATCATCTGTTTTTG
GCTACGAGCTTATCGCTGGCGAACGTCGTCTAAAAGCATCTAAACTAGCTGGTCTTAGTGAAATTCCAGCCATCATCAAA
ACCATTTCTGACCAAAAAAGCATGCAGCTTGCGATTATTGAAAATTTACAGCGCTCGGATTTAAATCCCATTGAAGAAGC
AAAAGCTTACAAGCAATTGCTTGAAAAAAATCAGATGACGCATGAGGAATTGGCTCAGTTCATGGGCAAATCGCGTCCCT
ACATTACCAATTGCCTACGATTACTAAATCTTCCGCCCAGCCTTTCACGCGCGGTGGAAGAAGGAAGCTTGTCGCAAGGT
CACGCTCGTTTGTTGTTGACCTTAAAGAGCAAAGAAGAACAGGAGCAGTGGTACCAACGCATTTTAAGCCAAGATATTAG
TGTCCGAAAACTGGAGCAACTCCTAAAACCCAAACCAAGTGCTCCCAAAAAGAAAGCGAAGAAGGATATTTTTAAAAAAC
ACCATGAAGACATCCTAAGTCAAAGTCTAGGACTGCCCGTTAGCATTTCGTTTGCTAATAGCAAAAGCACTCAAAAAGGA
GAAGTGGTTTTGCATTTTCAGTCGGAAGAAGACTTTAACAGAATTATCAACAAGTTCAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(149-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

60.618

99.615

0.604