Detailed information NTG0763804

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: OIY87_RS00805
• Genome accession: NZ_CP113954
• Coordinates: 121065..121967 (+)
• Length: 300 a.a.
• NCBI ID: WP_074658501.1
• Uniprot ID: -
• Organism: Streptococcus gallolyticus strain XH2168
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 116065..126967

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIY87_RS00780 (OIY87_02075)	-	117271..117720 (+)	450	WP_269725077.1	DUF523 domain-containing protein	-
OIY87_RS00785 (OIY87_02080)	purE	117720..118208 (+)	489	WP_061458775.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
OIY87_RS00790 (OIY87_02085)	purK	118195..119286 (+)	1092	WP_268736747.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
OIY87_RS00795 (OIY87_02090)	-	119306..119530 (+)	225	WP_061458915.1	hypothetical protein	-
OIY87_RS00800 (OIY87_02095)	purB	119620..120918 (+)	1299	WP_009853197.1	adenylosuccinate lyase	-
OIY87_RS00805 (OIY87_02100)	comR	121065..121967 (+)	903	WP_074658501.1	helix-turn-helix domain-containing protein	Regulator
OIY87_RS00810 (OIY87_02105)	proC	122114..122884 (-)	771	WP_077495933.1	pyrroline-5-carboxylate reductase	-
OIY87_RS00815 (OIY87_02110)	pepA	122945..124012 (-)	1068	WP_061458778.1	glutamyl aminopeptidase	-
OIY87_RS00820 (OIY87_02115)	-	124055..124564 (-)	510	WP_061458779.1	GNAT family N-acetyltransferase	-
OIY87_RS00825 (OIY87_02120)	-	125014..125307 (+)	294	WP_061458780.1	DUF4651 domain-containing protein	-
OIY87_RS00830 (OIY87_02125)	-	125300..125617 (+)	318	WP_009853246.1	thioredoxin family protein	-
OIY87_RS00835 (OIY87_02130)	ytpR	125626..126252 (+)	627	WP_253042165.1	YtpR family tRNA-binding protein	-

Sequence

Protein

• Length: 300 a.a.
• Molecular weight: 34985.00 Da
• Isoelectric Point: 4.6233

>NTDB_id=763804 OIY87_RS00805 WP_074658501.1 121065..121967(+) (comR) [Streptococcus gallolyticus strain XH2168]
MEKFGIKVRALREEKGISREEFCGDETELSVRQLARIESNQSIPSLSKAQFIANQLGVTLGTMTDGDSLELPRRYEELKY
LLIRTPTYGDKVRLGRKGEYFDEISEKFYDIIPEEERLIIDCLQAKLDVHFSDDVNFGEGILNDYFDQVRRKKNFQINDL
ILIDLYFACLASAKSFVGIYSLDLYDELMECLLNQENLSPETSLILNNVLLNNVDLVLRFHRESFMKRIIIKSDTIMTSV
HDFQRRPVLSLVEWKYYLQFKKDFLAAQKSYSNAILFANLIGDTYLENKLIEEWELDTTT

Nucleotide

• Length: 903 bp

>NTDB_id=763804 OIY87_RS00805 WP_074658501.1 121065..121967(+) (comR) [Streptococcus gallolyticus strain XH2168]
TTGGAAAAGTTTGGGATTAAAGTACGTGCATTAAGAGAGGAAAAGGGAATTTCACGTGAGGAATTCTGTGGTGATGAAAC
AGAATTGTCTGTGAGACAGCTAGCTAGGATTGAGTCCAATCAGTCAATTCCTAGCCTAAGTAAAGCCCAATTCATTGCCA
ATCAACTTGGTGTTACCTTGGGTACAATGACGGATGGTGATAGCTTGGAATTGCCTAGACGGTATGAAGAGTTAAAGTAT
CTTTTGATTCGTACGCCGACATATGGGGATAAAGTTAGACTGGGACGTAAGGGAGAATATTTTGACGAAATTTCAGAGAA
ATTTTATGATATTATTCCCGAAGAAGAAAGATTAATCATTGATTGCTTACAAGCTAAACTGGATGTCCATTTTAGTGATG
ATGTTAATTTTGGTGAAGGAATTTTAAATGATTATTTTGACCAAGTTAGACGAAAGAAGAACTTTCAAATTAATGATTTG
ATTTTAATAGATTTATATTTTGCTTGCCTTGCTTCTGCTAAATCGTTTGTGGGAATCTATAGCTTAGATTTGTATGATGA
ATTAATGGAGTGTTTACTAAATCAAGAAAATCTTTCACCAGAAACTTCTTTGATTTTAAATAATGTTTTGTTAAATAATG
TAGATTTGGTTTTACGATTCCATAGAGAATCTTTTATGAAACGAATTATTATAAAAAGTGACACTATCATGACAAGTGTT
CATGATTTTCAAAGACGTCCAGTTTTAAGTTTAGTTGAGTGGAAATATTATTTACAATTTAAAAAAGATTTTTTAGCGGC
ACAAAAATCTTACTCCAATGCTATTTTATTTGCTAACTTAATTGGAGATACTTATTTGGAAAATAAGTTAATAGAAGAAT
GGGAATTGGATACAACAACATGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (8-60)

• ComR tetratricopeptide (ComR_TPR) (72-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	76.307	95.667	0.73
comR	Streptococcus mutans UA159	54.181	99.667	0.54
comR	Streptococcus pyogenes MGAS8232	50	100	0.503
comR	Streptococcus pyogenes MGAS315	47.315	99.333	0.47
comR	Streptococcus suis P1/7	38.206	100	0.383
comR	Streptococcus suis 05ZYH33	38.206	100	0.383
comR	Streptococcus suis D9	36.667	100	0.367