Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QL281_RS20285 Genome accession   NZ_CP125292
Coordinates   3795382..3795957 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   O34857
Organism   Bacillus subtilis strain SRCM117797     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3790382..3800957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL281_RS20255 (QL281_20255) dapD 3790568..3791278 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QL281_RS20260 (QL281_20260) dapI 3791348..3792472 (+) 1125 WP_017697280.1 N-acetyldiaminopimelate deacetylase -
  QL281_RS20265 (QL281_20265) ykuS 3792534..3792779 (+) 246 WP_003232382.1 YkuS family protein -
  QL281_RS20270 (QL281_20270) mscT 3792816..3793619 (-) 804 WP_017697281.1 small-conductance mechanosensitive channel protein MscT -
  QL281_RS20275 (QL281_20275) ahpA 3793856..3794398 (+) 543 WP_017697282.1 biofilm-specific peroxidase AhpA -
  QL281_RS20280 (QL281_20280) ykuV 3794470..3794916 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  QL281_RS20285 (QL281_20285) rok 3795382..3795957 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  QL281_RS20290 (QL281_20290) - 3796078..3797228 (+) 1151 WP_087614160.1 IS3 family transposase -
  QL281_RS20295 (QL281_20295) cse15 3797288..3798253 (-) 966 WP_041335771.1 spore protein Cse15 -
  QL281_RS20300 (QL281_20300) mobA 3798390..3798989 (+) 600 WP_041335768.1 molybdenum cofactor guanylyltransferase -
  QL281_RS20305 (QL281_20305) moeB 3799040..3800059 (+) 1020 WP_041335765.1 molybdopterin-synthase adenylyltransferase MoeB -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=762329 QL281_RS20285 WP_003232378.1 3795382..3795957(+) (rok) [Bacillus subtilis strain SRCM117797]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=762329 QL281_RS20285 WP_003232378.1 3795382..3795957(+) (rok) [Bacillus subtilis strain SRCM117797]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5ZUX
  PDB 5ZUZ

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1