Detailed information NTG0762048

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OXA89_RS13670
• Genome accession: NZ_CP113434
• Coordinates: 3079329..3080396 (-)
• Length: 355 a.a.
• NCBI ID: WP_013101927.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain PATHC027
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3074329..3085396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OXA89_RS13645 (OXA89_13645)	-	3074619..3075335 (-)	717	WP_011947578.1	dienelactone hydrolase family protein	-
OXA89_RS13650 (OXA89_13650)	-	3075616..3076482 (+)	867	WP_027223995.1	alpha/beta hydrolase	-
OXA89_RS13655 (OXA89_13655)	rpoH	3076617..3077471 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
OXA89_RS13660 (OXA89_13660)	ftsX	3077769..3078698 (-)	930	WP_013101925.1	permease-like cell division protein FtsX	-
OXA89_RS13665 (OXA89_13665)	ftsE	3078692..3079342 (-)	651	WP_013101926.1	cell division ATP-binding protein FtsE	-
OXA89_RS13670 (OXA89_13670)	pilA	3079329..3080396 (-)	1068	WP_013101927.1	signal recognition particle-docking protein FtsY	Machinery gene
OXA89_RS13675 (OXA89_13675)	-	3080459..3081784 (+)	1326	WP_013101928.1	M16 family metallopeptidase	-
OXA89_RS13680 (OXA89_13680)	-	3081781..3083085 (+)	1305	WP_013101929.1	M16 family metallopeptidase	-
OXA89_RS13685 (OXA89_13685)	rsmD	3083082..3083627 (+)	546	WP_013101930.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
OXA89_RS13690 (OXA89_13690)	dotD	3083702..3084193 (+)	492	WP_014842716.1	type IVB secretion system lipoprotein DotD	-
OXA89_RS13695 (OXA89_13695)	dotC	3084174..3085085 (+)	912	WP_011216545.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39059.65 Da
• Isoelectric Point: 5.9087

>NTDB_id=762048 OXA89_RS13670 WP_013101927.1 3079329..3080396(-) (pilA) [Legionella pneumophila strain PATHC027]
MIKWFKRNQNSEPNLDTEEQQDHAESSMESRLEEPKELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYQTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDILIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=762048 OXA89_RS13670 WP_013101927.1 3079329..3080396(-) (pilA) [Legionella pneumophila strain PATHC027]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATACCGAAGAGCAACAAGATCATGCCGAAAGCAG
CATGGAATCCAGGCTTGAAGAGCCCAAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATTAGCCAG
GAGTTACTCGAAGAGCTGGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCAAGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCAGACTCTAAAGACAAATTTGCAAACGATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGTTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCTGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCTGCTGCGGTGGAGCAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATTTTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATATTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAATGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCAATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-130)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.811	84.789	0.482