Detailed information NTG0753367

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: OKW95_RS01570
• Genome accession: NZ_CP110254
• Coordinates: 336391..337449 (+)
• Length: 352 a.a.
• NCBI ID: WP_005300961.1
• Uniprot ID: A0AAJ1PFF8
• Organism: Acinetobacter oleivorans strain S4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 331391..342449

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OKW95_RS01555 (OKW95_01555)	-	332414..332746 (+)	333	WP_005300952.1	hypothetical protein	-
OKW95_RS01560 (OKW95_01560)	-	332749..333573 (+)	825	WP_323739874.1	putative RNA methyltransferase	-
OKW95_RS01565 (OKW95_01565)	ponA	333668..336229 (-)	2562	WP_323739875.1	penicillin-binding protein PBP1a	-
OKW95_RS01570 (OKW95_01570)	comM	336391..337449 (+)	1059	WP_005300961.1	pilus assembly protein PilM	Machinery gene
OKW95_RS01575 (OKW95_01575)	pilN	337449..338090 (+)	642	WP_005300964.1	PilN domain-containing protein	Machinery gene
OKW95_RS01580 (OKW95_01580)	pilO	338087..338836 (+)	750	WP_005300968.1	type 4a pilus biogenesis protein PilO	Machinery gene
OKW95_RS01585 (OKW95_01585)	pilP	338847..339374 (+)	528	WP_005300971.1	pilus assembly protein PilP	Machinery gene
OKW95_RS01590 (OKW95_01590)	pilQ	339438..341603 (+)	2166	WP_323739876.1	type IV pilus secretin PilQ family protein	Machinery gene
OKW95_RS01595 (OKW95_01595)	aroK	341615..342184 (+)	570	WP_004789808.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39048.67 Da
• Isoelectric Point: 4.4217

>NTDB_id=753367 OKW95_RS01570 WP_005300961.1 336391..337449(+) (comM) [Acinetobacter oleivorans strain S4]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTSNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQSGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDIQKLENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=753367 OKW95_RS01570 WP_005300961.1 336391..337449(+) (comM) [Acinetobacter oleivorans strain S4]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTGGAAAGCTATGCTTTGATGCCTTTACCCGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAGGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCAGTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAATGATGATGAACGAGAAGTTCAGAT
TCGTTTAGATGCGGAGCAGTATATACCGTTCCCTTTGGATGAAGTGAGTCTTGATTTTGAGGTTCTACCGGATCGACTGC
CTAATCCAAACCGTGTAAATGTACTTCTAGTTGCAACAAGAACAGAAAATGTTGAAACACGAGTAGAAGTGCTGGAGCTG
GTGGATCTAACGCCTAAGCTTGCTGATGTCGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTATTCGCTGATAGTTTACC
CATGGGTGCCAATACCATTGGTATTTTAGATATCGGCCATACCATGACTACATTATCGGTTATGCAAAGTGGCAAAATCA
TTTATACCCGTGAACAAGTCTTCGGCGGCAAGCAGCTTACTCTGGAAATTCAGAGCCGTTATGGTTTGTCATTGGAAGAA
GCGGGACGAGCTAAAAAAGAACGCTCTTTACCAGATGACTATGACATCGAAGTTTTAGAGCCATTTTTAGATGCCGTTGT
GCAGCAAGCAGCCAGATCTCTACAATTTTTCTTTTCTTCATCACAGTTCAATGAAATAGACCATATTTTACTAGCGGGTG
GGAATGCCAACATTCCTGGGCTTGCCAAATTGTTGCAGCAAAAACTTGGTTACCGTGTAACCATTGCCAATCCGTTTTTA
CAAATGGGTTTTTCTCCTCAAGTCGATATTCAAAAACTTGAAAATGATGCTTCATCATTAATGGTGGCATGTGGTTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	96.023	100	0.96
pilM	Acinetobacter baumannii D1279779	96.023	100	0.96
comM	Acinetobacter baylyi ADP1	82.102	100	0.821
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42