Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   OCX19_RS11365 Genome accession   NZ_AP024734
Coordinates   2258839..2259309 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain 59691     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2253839..2264309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCX19_RS11345 coaW 2254148..2254951 (+) 804 WP_000862727.1 type II pantothenate kinase -
  OCX19_RS11350 - 2255081..2255752 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  OCX19_RS11355 - 2256151..2257344 (-) 1194 WP_000183726.1 hypothetical protein -
  OCX19_RS11360 - 2257344..2258528 (-) 1185 WP_001291500.1 M20 family metallopeptidase -
  OCX19_RS11365 luxS 2258839..2259309 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  OCX19_RS11370 - 2259461..2259811 (-) 351 WP_001024030.1 hypothetical protein -
  OCX19_RS11375 - 2259825..2261126 (-) 1302 WP_001242310.1 pyrimidine-nucleoside phosphorylase -
  OCX19_RS11380 deoC 2261407..2262069 (-) 663 WP_117201042.1 deoxyribose-phosphate aldolase -
  OCX19_RS11385 deoD 2262384..2263094 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  OCX19_RS11390 - 2263215..2263658 (-) 444 WP_117201044.1 Dps family protein -
  OCX19_RS11395 - 2263858..2264271 (-) 414 WP_001123300.1 DUF393 domain-containing protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=75319 OCX19_RS11365 WP_000164421.1 2258839..2259309(+) (luxS) [Staphylococcus aureus strain 59691]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=75319 OCX19_RS11365 WP_000164421.1 2258839..2259309(+) (luxS) [Staphylococcus aureus strain 59691]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404

Multiple sequence alignment