Detailed information NTG0750937

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: OHM47_RS04650
• Genome accession: NZ_CP109939
• Coordinates: 907413..908084 (+)
• Length: 223 a.a.
• NCBI ID: WP_024385291.1
• Uniprot ID: A0A116K182
• Organism: Streptococcus suis strain ID36054
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 902413..913084

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHM47_RS04620 (OHM47_04620)	pstC	902641..903558 (+)	918	WP_002937619.1	phosphate ABC transporter permease subunit PstC	-
OHM47_RS04625 (OHM47_04625)	pstA	903548..904435 (+)	888	WP_002937616.1	phosphate ABC transporter permease PstA	-
OHM47_RS04630 (OHM47_04630)	pstB	904460..905263 (+)	804	WP_002937615.1	phosphate ABC transporter ATP-binding protein PstB	-
OHM47_RS04635 (OHM47_04635)	pstB	905275..906033 (+)	759	WP_002937614.1	phosphate ABC transporter ATP-binding protein PstB	-
OHM47_RS04640 (OHM47_04640)	phoU	906062..906718 (+)	657	WP_024394630.1	phosphate signaling complex protein PhoU	-
OHM47_RS11095	-	906884..907219 (+)	336	Protein_881	hypothetical protein	-
OHM47_RS04650 (OHM47_04650)	ciaR	907413..908084 (+)	672	WP_024385291.1	response regulator transcription factor	Regulator
OHM47_RS04655 (OHM47_04655)	ciaH	908077..909456 (+)	1380	WP_024394629.1	cell wall metabolism sensor histidine kinase WalK	Regulator
OHM47_RS04660 (OHM47_04660)	-	909780..911009 (+)	1230	WP_024394628.1	transglutaminase domain-containing protein	-
OHM47_RS04665 (OHM47_04665)	rpsT	911271..911519 (-)	249	WP_012027069.1	30S ribosomal protein S20	-
OHM47_RS04670 (OHM47_04670)	coaA	911578..912498 (-)	921	WP_024381359.1	type I pantothenate kinase	-

Sequence

Protein

• Length: 223 a.a.
• Molecular weight: 25231.80 Da
• Isoelectric Point: 4.2183

>NTDB_id=750937 OHM47_RS04650 WP_024385291.1 907413..908084(+) (ciaR) [Streptococcus suis strain ID36054]
MIKILLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGVYEAETGVYDLILLDLMLPEKDGFQVLKELREKGVTTPVLITTA
KESLEDKGHGFELGADDYLTKPFYLEELKMRIQALLKRAGKFNENTLTYGDVTVDLSTNSTTVNGEEVELLGKEFDLLVY
FLQNQNVILPKTQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTTFGENLQTLRSVGYILKNA

Nucleotide

• Length: 672 bp

>NTDB_id=750937 OHM47_RS04650 WP_024385291.1 907413..908084(+) (ciaR) [Streptococcus suis strain ID36054]
ATGATTAAAATATTGTTAGTGGAAGATGATTTAAGTCTATCAAATTCTGTTTTCGATTTCTTAGATGATTTTGCGGATGT
TATGCAGGTTTTTGATGGTGAAGAGGGCGTTTATGAGGCGGAAACAGGCGTTTATGATTTGATTCTTTTGGATTTAATGT
TGCCTGAAAAAGATGGCTTCCAAGTTTTGAAAGAATTACGTGAAAAAGGTGTTACGACACCTGTTCTGATTACAACAGCC
AAGGAAAGTCTAGAGGATAAAGGCCATGGTTTTGAATTGGGGGCTGATGACTATTTGACGAAACCGTTTTATTTAGAAGA
ATTGAAGATGCGAATTCAAGCTCTATTAAAACGAGCGGGTAAGTTTAATGAAAACACACTAACTTATGGGGACGTGACCG
TTGACTTATCGACAAACTCTACAACTGTAAATGGCGAAGAAGTTGAATTGCTAGGAAAAGAATTCGATCTACTAGTCTAC
TTCTTGCAAAATCAAAATGTTATCTTACCAAAAACTCAAATTTTTGACCGTATTTGGGGATTTGACAGTGACACTACTAT
TTCAGTAGTAGAAGTATATGTTTCTAAAATTAGGAAAAAGTTGAAAGGAACGACCTTCGGGGAAAATCTTCAAACCCTGC
GTAGTGTCGGGTACATTCTAAAAAATGCCTAA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (145-220)

• Response regulator receiver domain (Response_reg) (4-112)

3D structure

• AlphaFold DB: A0A116K182

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus mutans UA159	90.135	100	0.901
ciaR	Streptococcus pneumoniae Rx1	88.789	100	0.888
ciaR	Streptococcus pneumoniae D39	88.789	100	0.888
ciaR	Streptococcus pneumoniae R6	88.789	100	0.888
ciaR	Streptococcus pneumoniae TIGR4	88.789	100	0.888
covR	Lactococcus lactis subsp. lactis strain DGCC12653	38.053	100	0.386
vicR	Streptococcus mutans UA159	35.47	100	0.372
covR	Streptococcus salivarius strain HSISS4	36.283	100	0.368