Detailed information NTG0748659

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: OF801_RS06725
• Genome accession: NZ_CP109635
• Coordinates: 1339786..1340655 (+)
• Length: 289 a.a.
• NCBI ID: WP_264307787.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain Alexii-11_2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1334786..1345655

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OF801_RS06705 (OF801_06705)	-	1335114..1335734 (+)	621	WP_004257227.1	GntR family transcriptional regulator	-
OF801_RS06710 (OF801_06710)	-	1335939..1337141 (+)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
OF801_RS06715 (OF801_06715)	-	1337134..1338858 (+)	1725	WP_004257235.1	ABC transporter permease/substrate binding protein	-
OF801_RS06720 (OF801_06720)	budA	1339001..1339699 (+)	699	WP_004257238.1	acetolactate decarboxylase	-
OF801_RS06725 (OF801_06725)	dprA	1339786..1340655 (+)	870	WP_264307787.1	DNA-processing protein DprA	Machinery gene
OF801_RS06730 (OF801_06730)	topA	1340844..1342994 (+)	2151	WP_023888984.1	type I DNA topoisomerase	-
OF801_RS06735 (OF801_06735)	trmFO	1343040..1344383 (+)	1344	WP_264307788.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
OF801_RS06740 (OF801_06740)	-	1344456..1344677 (-)	222	WP_074749946.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32833.97 Da
• Isoelectric Point: 9.5559

>NTDB_id=748659 OF801_RS06725 WP_264307787.1 1339786..1340655(+) (dprA) [Lactococcus garvieae strain Alexii-11_2]
MIRNFEILRLKKAGVSNLGILKLIDYQEKHEAKLTLRQLARIAEVKAVPNFIESYKSQDVKRLREQYKTFPSFSILDDIY
PEWLKEMYNPPTLLFYQGNLKFLNFPKLGFVGSREMSKEAPKITYKLIEELKQSFVIVSGLARGVDTSSHVAAIKQQTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLVGEPPLKFHFPERNRIIAGLSRGIVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLITHGQDILDEFYLYEGNFLP

Nucleotide

• Length: 870 bp

>NTDB_id=748659 OF801_RS06725 WP_264307787.1 1339786..1340655(+) (dprA) [Lactococcus garvieae strain Alexii-11_2]
ATGATTAGAAATTTTGAAATATTGCGTTTGAAAAAAGCAGGAGTGTCGAATCTAGGGATTTTGAAACTGATTGACTATCA
AGAAAAGCATGAAGCAAAACTTACTTTACGACAGTTAGCGAGGATTGCAGAAGTCAAAGCTGTTCCTAATTTTATTGAGA
GTTACAAGAGTCAGGATGTGAAACGACTTCGAGAGCAATATAAGACCTTCCCTTCCTTTTCCATCTTAGACGACATTTAT
CCTGAATGGCTGAAAGAAATGTATAATCCCCCGACCCTCCTTTTTTATCAAGGAAATCTTAAGTTTCTTAACTTCCCTAA
ACTCGGATTTGTCGGGAGCCGTGAAATGTCTAAGGAAGCCCCTAAAATTACATACAAACTTATTGAGGAATTAAAACAAA
GCTTTGTTATAGTGAGCGGGTTAGCACGAGGTGTTGACACTTCTAGTCATGTAGCTGCTATAAAGCAACAAACACCAACC
ATTGCTGTCATTGGTAACGGTTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAGTATTTAGCAACTCATGA
ATTGGTTTTATCAGAATACCTTGTAGGAGAGCCGCCCCTTAAGTTTCATTTTCCAGAGAGAAATAGAATCATTGCGGGTC
TTTCTCGTGGAATTGTCGTTGTTGAAGCAAAGCAACGTAGCGGTAGCCTCATCACAAGTCGTTATGCCTTAGAGGGAAAT
AGAGAAGTCTTTGCTGTACCTGGAGATATTTTGAACAGAAATGCCTCTGGCTGTAATCAATTAATCCAGCAAGGTGCAGC
CAAGCTTATCACTCATGGTCAAGATATTTTGGATGAATTTTATTTATATGAAGGTAATTTCCTTCCTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.604	97.924	0.623
dprA	Streptococcus mutans UA159	55.197	96.54	0.533
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis SK321	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.047	96.54	0.512
dprA	Haemophilus influenzae Rd KW20	37.329	100	0.377