Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | F6Y15_RS14315 | Genome accession | NZ_AP020313 |
| Coordinates | 2819054..2819524 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934760.1 | Uniprot ID | A0AAN2D761 |
| Organism | Staphylococcus aureus strain KUH140046 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2814054..2824524
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F6Y15_RS14275 (KUH140046_2646) | - | 2814066..2814389 (+) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| F6Y15_RS14280 (KUH140046_2647) | - | 2814386..2814547 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| F6Y15_RS14285 (KUH140046_2648) | - | 2814642..2814944 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| F6Y15_RS14290 (KUH140046_2649) | - | 2814949..2815209 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| F6Y15_RS14295 (KUH140046_2650) | - | 2815218..2815481 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| F6Y15_RS14300 (KUH140046_2651) | - | 2815490..2817433 (+) | 1944 | WP_000700555.1 | AAA family ATPase | - |
| F6Y15_RS14305 (KUH140046_2652) | - | 2817435..2818355 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| F6Y15_RS14310 (KUH140046_2653) | - | 2818436..2819053 (+) | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| F6Y15_RS14315 (KUH140046_2654) | ssbA | 2819054..2819524 (+) | 471 | WP_000934760.1 | single-stranded DNA-binding protein | Machinery gene |
| F6Y15_RS14320 (KUH140046_2655) | - | 2819554..2820447 (+) | 894 | WP_000148321.1 | DnaD domain protein | - |
| F6Y15_RS14325 (KUH140046_2656) | - | 2820454..2820672 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| F6Y15_RS14330 (KUH140046_2657) | - | 2820681..2821085 (+) | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F6Y15_RS14335 (KUH140046_2658) | - | 2821098..2821466 (+) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| F6Y15_RS14340 (KUH140046_2659) | - | 2821470..2821712 (+) | 243 | WP_000131370.1 | SAV1978 family virulence-associated passenger protein | - |
| F6Y15_RS14345 (KUH140046_2660) | - | 2821727..2821975 (+) | 249 | WP_001065094.1 | DUF1024 family protein | - |
| F6Y15_RS14350 (KUH140046_2661) | - | 2821968..2822504 (+) | 537 | WP_001066447.1 | dUTP diphosphatase | - |
| F6Y15_RS14355 (KUH140046_2662) | - | 2822541..2822786 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| F6Y15_RS14360 (KUH140046_2663) | - | 2822783..2822989 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| F6Y15_RS14365 (KUH140046_2664) | - | 2822986..2823372 (+) | 387 | WP_000592207.1 | hypothetical protein | - |
| F6Y15_RS14370 (KUH140046_2665) | rinB | 2823369..2823518 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| F6Y15_RS14375 (KUH140046_2666) | - | 2823518..2823718 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| F6Y15_RS14380 (KUH140046_2667) | - | 2823746..2824162 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=74655 F6Y15_RS14315 WP_000934760.1 2819054..2819524(+) (ssbA) [Staphylococcus aureus strain KUH140046]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=74655 F6Y15_RS14315 WP_000934760.1 2819054..2819524(+) (ssbA) [Staphylococcus aureus strain KUH140046]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.372 |
| ssb | Neisseria meningitidis MC58 |
32.948 |
100 |
0.365 |
| ssb | Neisseria gonorrhoeae MS11 |
32.948 |
100 |
0.365 |