Detailed information NTG0074050

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AA2Tth_RS07270
• Genome accession: NZ_AP019792
• Coordinates: 1367684..1368817 (+)
• Length: 377 a.a.
• NCBI ID: WP_143586068.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain AA2-20
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1362684..1373817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AA2Tth_RS07230 (TthAA220_14170)	-	1362687..1363445 (+)	759	WP_143586058.1	type III pantothenate kinase	-
AA2Tth_RS07235 (TthAA220_14180)	-	1363408..1363773 (-)	366	WP_172619229.1	hypothetical protein	-
AA2Tth_RS07255 (TthAA220_14190)	-	1364542..1365948 (+)	1407	WP_143586064.1	HD domain-containing phosphohydrolase	-
AA2Tth_RS07260 (TthAA220_14200)	-	1365999..1366490 (+)	492	WP_143586973.1	DUF5317 domain-containing protein	-
AA2Tth_RS07265 (TthAA220_14210)	-	1366545..1367549 (+)	1005	WP_143586066.1	homoisocitrate dehydrogenase	-
AA2Tth_RS07270 (TthAA220_14220)	pilM	1367684..1368817 (+)	1134	WP_143586068.1	type IV pilus assembly protein PilM	Machinery gene
AA2Tth_RS07275 (TthAA220_14230)	pilN	1368810..1369433 (+)	624	WP_011228637.1	competence protein	Machinery gene
AA2Tth_RS07280 (TthAA220_14240)	pilO	1369423..1370004 (+)	582	WP_143586070.1	type 4a pilus biogenesis protein PilO	Machinery gene
AA2Tth_RS07285 (TthAA220_14250)	pilW	1370001..1370891 (+)	891	WP_143586072.1	competence protein	Machinery gene
AA2Tth_RS07290 (TthAA220_14260)	pilQ	1370888..1373161 (+)	2274	WP_143586074.1	secretin N-terminal domain-containing protein	Machinery gene

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 41334.90 Da
• Isoelectric Point: 4.3805

>NTDB_id=74050 AA2Tth_RS07270 WP_143586068.1 1367684..1368817(+) (pilM) [Thermus thermophilus strain AA2-20]
MFKSLSQLFRPRVEALGLEIGASALKLVEVSGNPPALKALASRPTPPGLLVEGMVAEPAALAQEIKELLLEARTRKRYVV
TALSNLAVILRPIQVPKMPLKEMEEAVRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAAARQEAVAGVLEAL
RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARSFNLDLLA
AEEVKRTYGMATIPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLR
GLASLLTDTLGVNFEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRGVEPLD

Nucleotide

• Length: 1134 bp

>NTDB_id=74050 AA2Tth_RS07270 WP_143586068.1 1367684..1368817(+) (pilM) [Thermus thermophilus strain AA2-20]
GTGTTCAAAAGCCTTAGCCAGCTCTTCCGACCCAGGGTTGAGGCCCTGGGGTTGGAGATCGGGGCCTCCGCCCTGAAGCT
CGTGGAGGTGTCCGGGAACCCCCCTGCCCTCAAGGCCCTGGCCTCCCGCCCCACCCCGCCCGGCCTCCTGGTGGAAGGGA
TGGTGGCCGAGCCTGCCGCGTTGGCCCAGGAGATCAAGGAGCTTCTCCTCGAGGCCCGCACCCGCAAGCGCTACGTGGTC
ACCGCCCTCTCCAACCTGGCGGTGATCCTCCGCCCCATCCAGGTCCCCAAGATGCCCCTCAAGGAGATGGAGGAGGCGGT
GCGCTGGGAGGCGGAGCGCTACATTCCCTTCCCCATTGACGAGGTGGTCCTGGACTTCGCCCCCCTGACCCCCCTCTCCG
AGGTGCAGGAGGGGGAGCAGGTCCAGGTGATGGTGGCGGCGGCGCGGCAGGAGGCGGTGGCGGGGGTCCTCGAGGCCCTG
AGGGGGGCGGGGCTCGTCCCCGTGGTGCTGGACGTGAAGCCCTTCGCCGGGCTTTACCCTCTGGAGGCCAGGCTTGCGGA
GGAGCCCGACCGGGTCTTCCTCGTCCTGGACATCGGGGCCGAGAGCACGAGCCTCGTCCTGCTCCGGGGGGACAAGCCCC
TGGCGGTGCGCGTCCTCACCCTCTCGGGCAAGGACTTCACCGAGGCCATCGCCCGAAGCTTCAACCTGGACCTCCTCGCC
GCCGAGGAGGTGAAGCGGACCTACGGGATGGCCACCATCCCCACCGAGGACGAGGAACTCCTCCTGGACTTTGACGCCGA
GCGGGAGCGCTACAGCCCGGGGCGCATCTACGACGCCATCCGCCCGGTGCTGGTGGAACTCACCCAGGAGCTCCGCCGTA
GCCTGGAGTTCTTCCGCATCCAGCTGGAGGAGGCCTCGCCCGAGGTGGGCTACCTCCTGGGCGGGGGGAGCAAGCTCAGG
GGGCTCGCCTCCCTCCTCACCGACACCCTGGGGGTGAACTTTGAGCCCGTCAACCCCTGGGAGGCGGTGGCGGTGGACCC
CAAGCGCTTTGAGTCGGAGCAACTCCAGGAGATCGGGCCGGAGTTCGCCGTGGCCCTGGGCTTGGCGTTGAGGGGGGTGG
AGCCCCTTGATTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-372)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Thermus thermophilus HB27	99.204	100	0.992