Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | AA2Tth_RS07280 | Genome accession | NZ_AP019792 |
| Coordinates | 1369423..1370004 (+) | Length | 193 a.a. |
| NCBI ID | WP_143586070.1 | Uniprot ID | A0AAD1NYJ2 |
| Organism | Thermus thermophilus strain AA2-20 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1364423..1375004
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AA2Tth_RS07255 (TthAA220_14190) | - | 1364542..1365948 (+) | 1407 | WP_143586064.1 | HD domain-containing phosphohydrolase | - |
| AA2Tth_RS07260 (TthAA220_14200) | - | 1365999..1366490 (+) | 492 | WP_143586973.1 | DUF5317 domain-containing protein | - |
| AA2Tth_RS07265 (TthAA220_14210) | - | 1366545..1367549 (+) | 1005 | WP_143586066.1 | homoisocitrate dehydrogenase | - |
| AA2Tth_RS07270 (TthAA220_14220) | pilM | 1367684..1368817 (+) | 1134 | WP_143586068.1 | type IV pilus assembly protein PilM | Machinery gene |
| AA2Tth_RS07275 (TthAA220_14230) | pilN | 1368810..1369433 (+) | 624 | WP_011228637.1 | competence protein | Machinery gene |
| AA2Tth_RS07280 (TthAA220_14240) | pilO | 1369423..1370004 (+) | 582 | WP_143586070.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AA2Tth_RS07285 (TthAA220_14250) | pilW | 1370001..1370891 (+) | 891 | WP_143586072.1 | competence protein | Machinery gene |
| AA2Tth_RS07290 (TthAA220_14260) | pilQ | 1370888..1373161 (+) | 2274 | WP_143586074.1 | secretin N-terminal domain-containing protein | Machinery gene |
| AA2Tth_RS07295 (TthAA220_14270) | aroC | 1373220..1374371 (+) | 1152 | WP_143586076.1 | chorismate synthase | - |
| AA2Tth_RS07300 (TthAA220_14280) | - | 1374396..1374950 (+) | 555 | WP_143586078.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21340.64 Da Isoelectric Point: 6.4566
>NTDB_id=74052 AA2Tth_RS07280 WP_143586070.1 1369423..1370004(+) (pilO) [Thermus thermophilus strain AA2-20]
MLARLGQREWALLAMVLTALLGLLWYYLLIVPTRQEIATVRQEIDRLTIERNRGLQAQRALPELRATIAALQAQRLAFLR
ALPREERLAEVLSEVLQDAEASGVVVRSFTRSRTSAPVPEVRAVNLALALEAPFPETYAYLRRLEDLSRFSTLSGLNLSV
QSQEANPTLATSLTLTVYVLAQGVEAETGGSTP
MLARLGQREWALLAMVLTALLGLLWYYLLIVPTRQEIATVRQEIDRLTIERNRGLQAQRALPELRATIAALQAQRLAFLR
ALPREERLAEVLSEVLQDAEASGVVVRSFTRSRTSAPVPEVRAVNLALALEAPFPETYAYLRRLEDLSRFSTLSGLNLSV
QSQEANPTLATSLTLTVYVLAQGVEAETGGSTP
Nucleotide
Download Length: 582 bp
>NTDB_id=74052 AA2Tth_RS07280 WP_143586070.1 1369423..1370004(+) (pilO) [Thermus thermophilus strain AA2-20]
GTGCTCGCTAGGCTAGGACAGCGGGAGTGGGCCCTCCTGGCCATGGTCCTCACCGCCCTCCTGGGGCTCCTCTGGTACTA
CCTGCTCATCGTGCCCACGAGGCAGGAGATCGCGACCGTCCGGCAGGAGATTGACCGCCTCACCATAGAGCGCAACCGCG
GGCTCCAGGCCCAGCGGGCCCTTCCCGAGCTCCGCGCCACCATCGCCGCCCTTCAGGCCCAAAGGCTCGCCTTCCTCCGG
GCCCTGCCCCGGGAGGAAAGGCTCGCCGAGGTCCTCTCCGAGGTGCTCCAGGACGCGGAGGCAAGCGGGGTGGTGGTCCG
AAGCTTCACCCGAAGCCGCACCTCGGCCCCGGTGCCCGAGGTGCGGGCCGTGAACCTGGCCCTGGCCCTCGAGGCCCCCT
TCCCCGAGACCTACGCCTACCTGCGGCGCCTGGAGGACCTCTCCCGCTTCAGCACCCTTTCCGGCCTCAACCTGAGCGTC
CAGAGCCAGGAAGCGAACCCCACCCTCGCCACCAGCCTCACCTTGACCGTCTACGTGCTGGCCCAGGGGGTGGAGGCGGA
AACGGGAGGGAGCACCCCATGA
GTGCTCGCTAGGCTAGGACAGCGGGAGTGGGCCCTCCTGGCCATGGTCCTCACCGCCCTCCTGGGGCTCCTCTGGTACTA
CCTGCTCATCGTGCCCACGAGGCAGGAGATCGCGACCGTCCGGCAGGAGATTGACCGCCTCACCATAGAGCGCAACCGCG
GGCTCCAGGCCCAGCGGGCCCTTCCCGAGCTCCGCGCCACCATCGCCGCCCTTCAGGCCCAAAGGCTCGCCTTCCTCCGG
GCCCTGCCCCGGGAGGAAAGGCTCGCCGAGGTCCTCTCCGAGGTGCTCCAGGACGCGGAGGCAAGCGGGGTGGTGGTCCG
AAGCTTCACCCGAAGCCGCACCTCGGCCCCGGTGCCCGAGGTGCGGGCCGTGAACCTGGCCCTGGCCCTCGAGGCCCCCT
TCCCCGAGACCTACGCCTACCTGCGGCGCCTGGAGGACCTCTCCCGCTTCAGCACCCTTTCCGGCCTCAACCTGAGCGTC
CAGAGCCAGGAAGCGAACCCCACCCTCGCCACCAGCCTCACCTTGACCGTCTACGTGCTGGCCCAGGGGGTGGAGGCGGA
AACGGGAGGGAGCACCCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Thermus thermophilus HB27 |
99.482 |
100 |
0.995 |