Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   N7921_RS07570 Genome accession   NZ_CP106652
Coordinates   1449036..1449497 (-) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus safensis strain 33.4     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1444036..1454497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7921_RS07545 (N7921_07545) - 1444638..1445522 (+) 885 WP_263640179.1 cation diffusion facilitator family transporter -
  N7921_RS07550 (N7921_07550) - 1445587..1445739 (-) 153 WP_162842519.1 hypothetical protein -
  N7921_RS07555 (N7921_07555) - 1446041..1446580 (+) 540 WP_024424707.1 RDD family protein -
  N7921_RS07560 (N7921_07560) - 1446706..1448016 (+) 1311 WP_263640180.1 MFS transporter -
  N7921_RS07565 (N7921_07565) - 1448090..1448998 (+) 909 WP_095408359.1 chemotaxis protein -
  N7921_RS07570 (N7921_07570) kre 1449036..1449497 (-) 462 WP_008356877.1 YkyB family protein Regulator
  N7921_RS07575 (N7921_07575) - 1449971..1450144 (+) 174 WP_186318630.1 hypothetical protein -
  N7921_RS07580 (N7921_07580) - 1450557..1451483 (-) 927 WP_144470346.1 AraC family transcriptional regulator -
  N7921_RS07585 (N7921_07585) - 1451597..1452493 (+) 897 WP_144470348.1 DMT family transporter -
  N7921_RS07590 (N7921_07590) - 1452647..1452862 (-) 216 WP_075622942.1 hypothetical protein -
  N7921_RS07595 (N7921_07595) - 1453109..1454386 (-) 1278 WP_048238778.1 MFS transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=733711 N7921_RS07570 WP_008356877.1 1449036..1449497(-) (kre) [Bacillus safensis strain 33.4]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=733711 N7921_RS07570 WP_008356877.1 1449036..1449497(-) (kre) [Bacillus safensis strain 33.4]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGAGCGCTGCAAAAACTATTACAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTACACAAAGCCCGTCTTCAAACGACTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765