Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   N7921_RS07695 Genome accession   NZ_CP106652
Coordinates   1469435..1470007 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus safensis strain 33.4     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1464435..1475007
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7921_RS07665 (N7921_07665) dapD 1464549..1465259 (+) 711 WP_095408367.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  N7921_RS07670 (N7921_07670) - 1465294..1466472 (+) 1179 WP_144470356.1 N-acetyldiaminopimelate deacetylase -
  N7921_RS07675 (N7921_07675) - 1466523..1466765 (+) 243 WP_024424725.1 YkuS family protein -
  N7921_RS07680 (N7921_07680) - 1466788..1467597 (-) 810 WP_095408368.1 mechanosensitive ion channel family protein -
  N7921_RS07685 (N7921_07685) ahpA 1467870..1468412 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  N7921_RS07690 (N7921_07690) - 1468495..1468953 (+) 459 WP_024424727.1 TlpA family protein disulfide reductase -
  N7921_RS07695 (N7921_07695) rok 1469435..1470007 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  N7921_RS07700 (N7921_07700) - 1470054..1470971 (-) 918 WP_095408369.1 sigmaE regulated sporulation protein -
  N7921_RS07705 (N7921_07705) - 1471057..1471638 (+) 582 WP_144470358.1 molybdenum cofactor guanylyltransferase -
  N7921_RS07710 (N7921_07710) - 1471669..1472685 (+) 1017 WP_263640181.1 thiazole biosynthesis adenylyltransferase ThiF -
  N7921_RS07715 (N7921_07715) glp 1472695..1473972 (+) 1278 WP_263640182.1 gephyrin-like molybdotransferase Glp -
  N7921_RS07720 (N7921_07720) mobB 1473954..1474478 (+) 525 WP_095408683.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  N7921_RS07725 (N7921_07725) - 1474475..1474966 (+) 492 WP_058837772.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=733712 N7921_RS07695 WP_024426871.1 1469435..1470007(+) (rok) [Bacillus safensis strain 33.4]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=733712 N7921_RS07695 WP_024426871.1 1469435..1470007(+) (rok) [Bacillus safensis strain 33.4]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAGACGGATTCACTCCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCTTCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCCCGCCCTGGTTCAAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAGCGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGTTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8