Detailed information NTG0732834

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: N0O74_RS04795
• Genome accession: NZ_CP104863
• Coordinates: 1086059..1087432 (-)
• Length: 457 a.a.
• NCBI ID: WP_005410795.1
• Uniprot ID: A0A854E393
• Organism: Stenotrophomonas maltophilia strain CW002SM
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1081059..1092432

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N0O74_RS04775 (N0O74_04775)	pilC	1081556..1082815 (-)	1260	WP_076739181.1	type II secretion system F family protein	Machinery gene
N0O74_RS04780 (N0O74_04780)	pilA	1083173..1083604 (+)	432	WP_076739180.1	pilin	Machinery gene
N0O74_RS04785 (N0O74_04785)	-	1083713..1084135 (+)	423	WP_076739179.1	pilin	-
N0O74_RS04790 (N0O74_04790)	pilB	1084201..1085934 (+)	1734	WP_076739178.1	type IV-A pilus assembly ATPase PilB	Machinery gene
N0O74_RS04795 (N0O74_04795)	pilR	1086059..1087432 (-)	1374	WP_005410795.1	sigma-54 dependent transcriptional regulator	Regulator
N0O74_RS04800 (N0O74_04800)	-	1087493..1089106 (-)	1614	WP_049403027.1	ATP-binding protein	-
N0O74_RS04805 (N0O74_04805)	sucC	1089464..1090633 (+)	1170	WP_004154430.1	ADP-forming succinate--CoA ligase subunit beta	-
N0O74_RS04810 (N0O74_04810)	sucD	1090655..1091530 (+)	876	WP_005410793.1	succinate--CoA ligase subunit alpha	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49515.76 Da
• Isoelectric Point: 6.4407

>NTDB_id=732834 N0O74_RS04795 WP_005410795.1 1086059..1087432(-) (pilR) [Stenotrophomonas maltophilia strain CW002SM]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHALELNNAERPAPGPNAEQGGRLLGHSQAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELKVPPLRERRQDLPE
LAAAVLARLARSHGRATPLLAPSALEALAQYAFPGNVRELENILERALALAEEDCIGADDLRLPQHAPRAPGSAAPAEAV
ADLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=732834 N0O74_RS04795 WP_005410795.1 1086059..1087432(-) (pilR) [Stenotrophomonas maltophilia strain CW002SM]
ATGAATGAAACCCGCAGCGCCCTCGTCGTCGACGACGAACGCGACATCCGCGAACTGCTGGTGCTGACCCTCGGCCGCAT
GGGGCTGCGCATCAGTACCGCCGCCAACCTGGCCGAGGCACGTGAGCTGCTGGCCAGCAATCCGTACGACCTGTGCATCA
CCGACATGCGCCTGCCCGATGGCAACGGCATCGAACTGGTCAGCGAGATCGCCCAGCACTACCCGCGCACGCCGGTGGCG
ATGATCACCGCATTCGGCAGCATGGATCTCGCTGTGGAGGCACTGAAGGCCGGTGCGTTCGATTTCGTCAGCAAGCCGGT
GGACATCTCGGTGCTGCGCGGACTGGTCAAGCACGCGCTGGAACTCAACAACGCCGAGCGCCCGGCACCGGGCCCCAACG
CCGAACAGGGCGGGCGCCTGCTGGGCCACTCGCAGGCCATGGATGTGCTGCGCACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTCGGCGAGTCGGGCGTCGGCAAGGAGCTGGTTGCACGCACCATCCATGCCCAGGGCGCGCG
CGCGGCCGGCCCGTTCGTGCCGGTCAACTGCGGTGCCATTCCCGGCGAGCTGATGGAGAGCGAATTCTTCGGCCACCGCA
AGGGCAGTTTCAGCGGCGCACACGCTGACAAGCCTGGCCTGTTCCAGGCTGCGCACGGCGGCACCCTGTTCCTGGACGAA
GTGGCTGAACTGCCGCTGCAGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAGTCGGTGCGCGCGGTGGGCGCGGC
CAACGAGGAGCCGGTGGATGTCCGCATCCTCTCGGCCACCCACAAGGACCTGGCCGAGCTGGTCGAGGACGGGCGCTTCC
GCCACGACCTGTACTACCGCATCAACGTGATCGAACTGAAGGTGCCGCCACTGCGCGAACGCCGCCAGGACCTGCCCGAA
CTGGCCGCCGCCGTGCTGGCCCGCCTGGCCCGCAGCCACGGCCGCGCCACCCCGCTGCTGGCGCCGTCGGCGTTGGAAGC
ACTGGCGCAGTACGCGTTCCCGGGCAATGTGCGCGAGCTGGAGAACATCCTGGAACGTGCGCTGGCCCTGGCCGAGGAAG
ACTGCATCGGCGCCGATGACCTGCGCCTGCCGCAGCACGCGCCGCGTGCACCCGGCAGTGCCGCGCCCGCCGAAGCCGTG
GCCGACCTGCAGCCGGGCAGCGCCGCCCTGCCCTCCTACATCGAGCAGCTCGAGCGCAGCGCCATCCAGCGTGCGCTGGA
AGAGAACCGCTGGAACAAGACCCGTACCGCCGCGCAGCTGGGCATCACCTTCCGTGCGCTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: A0A854E393

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.656	99.344	0.632
pilR	Acinetobacter baumannii strain A118	48.38	100	0.49
luxO	Vibrio cholerae strain A1552	37.079	97.374	0.361