Detailed information NTG0072993

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: Vt282_RS00220
• Genome accession: NZ_AP019649
• Coordinates: 49387..50502 (+)
• Length: 371 a.a.
• NCBI ID: WP_162062262.1
• Uniprot ID: -
• Organism: Vibrio taketomensis strain C4III282
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 44387..55502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Vt282_RS00200	rsmB	45299..46579 (-)	1281	WP_162062260.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
Vt282_RS00205	fmt	46669..47616 (-)	948	WP_162062261.1	methionyl-tRNA formyltransferase	-
Vt282_RS00210	def	47652..48164 (-)	513	WP_162047468.1	peptide deformylase	-
Vt282_RS00215	-	48336..49394 (+)	1059	WP_232055071.1	LysM peptidoglycan-binding domain-containing protein	-
Vt282_RS00220	dprA	49387..50502 (+)	1116	WP_162062262.1	DNA-processing protein DprA	Machinery gene
Vt282_RS00225	-	50505..50981 (+)	477	WP_162047466.1	DUF494 family protein	-
Vt282_RS00230	-	50996..51577 (+)	582	WP_162062263.1	type I DNA topoisomerase	-
Vt282_RS00235	-	51633..52766 (-)	1134	WP_162063647.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
Vt282_RS00240	purE	52770..53255 (-)	486	WP_162062264.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
Vt282_RS00245	-	53450..54007 (+)	558	WP_162062265.1	L-threonylcarbamoyladenylate synthase	-
Vt282_RS00250	hemF	54022..54942 (+)	921	WP_162062266.1	oxygen-dependent coproporphyrinogen oxidase	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 40122.06 Da
• Isoelectric Point: 7.2718

>NTDB_id=72993 Vt282_RS00220 WP_162062262.1 49387..50502(+) (dprA) [Vibrio taketomensis strain C4III282]
MSNAALVAWLTLYSVPRLGIKGLQKLLAKASPEQIVAWETMQLQASGLTAAQVKAITHPNQRYLESCLQWQAQSPHHHIL
TLDDSRYPFRLKQIPDPPPLLFVQGDPSKLSLPQVAMVGSRHASIDGLNSAQYFAAAIAEQGLVVTSGLALGVDGHAHDG
ALKAGGDTLAVLGCGLNTIYPARHRQLATRIEQQGALISEFPPDILPKAANFPRRNRIISGLSLAVLVVEATEKSGSLIT
ARFAAEHGRDVFALPGSIHTPQARGCNQLIKQGACLVQTPQDIFDEIDSLIRWSDSYIASEQNQNLLTKETKEQLPFAEL
LANLGTKVTPVDILAQRTNIPVQEVMMQLLELELSGHVVAVSGGYIRNGRG

Nucleotide

• Length: 1116 bp

>NTDB_id=72993 Vt282_RS00220 WP_162062262.1 49387..50502(+) (dprA) [Vibrio taketomensis strain C4III282]
ATGAGTAATGCAGCATTAGTCGCTTGGCTAACCTTATATTCCGTTCCTCGTTTAGGAATTAAGGGCTTACAAAAGTTATT
GGCAAAAGCGTCTCCTGAGCAAATCGTTGCTTGGGAGACGATGCAGTTGCAGGCATCCGGCCTGACAGCTGCACAAGTGA
AGGCGATAACCCATCCGAACCAACGTTATTTAGAGAGTTGCCTACAATGGCAAGCTCAATCCCCTCACCATCATATTTTG
ACGCTAGACGATTCGAGATACCCATTTCGTTTAAAACAGATTCCTGATCCGCCACCGTTACTTTTTGTACAAGGAGATCC
GAGCAAGTTAAGTCTGCCGCAAGTTGCAATGGTGGGTAGTCGTCATGCATCAATTGATGGGCTAAATAGCGCTCAATATT
TTGCCGCTGCGATTGCAGAGCAAGGGTTGGTGGTGACTAGCGGTTTAGCGCTGGGTGTTGATGGACATGCTCATGATGGT
GCGCTTAAGGCCGGCGGCGATACTTTAGCTGTTTTAGGCTGCGGTCTTAATACGATTTATCCGGCTCGACATCGACAACT
TGCCACGCGCATTGAGCAGCAAGGCGCACTTATTTCTGAGTTTCCGCCTGATATCCTTCCGAAAGCCGCCAATTTTCCAC
GCCGTAATCGTATTATTAGCGGCCTCTCTTTAGCCGTATTAGTCGTGGAGGCGACCGAAAAAAGTGGCTCGTTGATTACC
GCCCGTTTTGCAGCGGAACACGGCCGAGATGTCTTTGCATTACCTGGCTCGATTCATACGCCTCAAGCCAGAGGTTGTAA
TCAGTTGATCAAGCAAGGCGCCTGTTTGGTACAAACCCCGCAGGATATATTTGATGAAATAGATAGCCTAATTCGCTGGT
CTGATTCGTATATAGCTTCAGAGCAAAATCAAAATTTGCTGACAAAAGAAACGAAAGAACAATTGCCATTTGCCGAGCTT
CTAGCTAATTTAGGCACAAAAGTGACACCTGTTGATATTCTTGCTCAAAGGACCAATATTCCTGTGCAAGAAGTCATGAT
GCAGCTTTTAGAGCTTGAGCTCTCTGGGCATGTTGTTGCGGTTTCCGGTGGCTATATTCGTAATGGGAGGGGCTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (318-364)

• DNA recombination-mediator protein A (DNA_processg_A) (74-278)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio campbellii strain DS40M4	61.853	98.922	0.612
dprA	Vibrio cholerae strain A1552	54.447	100	0.544
dprA	Glaesserella parasuis strain SC1401	43.127	100	0.431
dprA	Legionella pneumophila strain ERS1305867	42.5	97.035	0.412
dprA	Acinetobacter baumannii D1279779	42.433	90.836	0.385
dprA	Acinetobacter baylyi ADP1	38.753	99.461	0.385
dprA	Acinetobacter baumannii strain A118	42.012	91.105	0.383