Detailed information NTG0728635

Bioinformatically predicted

Overview

• Name: ctsE
• Type: Machinery gene
• Locus tag: N3Z98_RS06570
• Genome accession: NZ_CP104325
• Coordinates: 1297660..1299207 (+)
• Length: 515 a.a.
• NCBI ID: WP_412766738.1
• Uniprot ID: -
• Organism: Campylobacter hepaticus strain RBCL71delta
• Function: type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1292660..1304207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N3Z98_RS06550 (N3Z98_06550)	ctsR	1294786..1295082 (+)	297	WP_066779503.1	transformation system protein	Machinery gene
N3Z98_RS06555 (N3Z98_06555)	ctsD	1295060..1296478 (+)	1419	WP_066779506.1	pilus (MSHA type) biogenesis protein MshL	Machinery gene
N3Z98_RS06560 (N3Z98_06560)	ctsP	1296471..1297079 (+)	609	WP_066779509.1	ATP-binding protein	Machinery gene
N3Z98_RS06565 (N3Z98_06565)	ctsX	1297083..1297658 (+)	576	WP_066779512.1	transformation system protein	Machinery gene
N3Z98_RS06570 (N3Z98_06570)	ctsE	1297660..1299207 (+)	1548	WP_412766738.1	GspE/PulE family protein	Machinery gene
N3Z98_RS06575 (N3Z98_06575)	ctsF	1299204..1300382 (+)	1179	WP_131952302.1	type II secretion system F family protein	Machinery gene

Sequence

Protein

• Length: 515 a.a.
• Molecular weight: 59334.99 Da
• Isoelectric Point: 6.2570

>NTDB_id=728635 N3Z98_RS06570 WP_412766738.1 1297660..1299207(+) (ctsE) [Campylobacter hepaticus strain RBCL71delta]
MEAIFQAYINDNMSLDQICKQCSCSVDEFFQKLAHFYKIDFIDLDQYDHFIYENMPFSLFEKFRFLLIENANGFLIVRSK
PCSLELLEQVKNFVFCENMSMVIANELKITKILNQIRIQEKMSKLSTKLRLEWQEKEKKDDQSCISQIFDFLLNEILPFN
ASDMHIEARADDALIRFRVDGILHQLLECQKDVYEALVFYIKFLACLNLAESRKAQDGSFTLDFKNEKYDFRVSCLPLIY
GESIVIRILKHNKAILELNKLNLGDKNLQIVKNTLKRSHGMILLTGPTGSSKSTTLYACLNALKSIEKKIISAEDPIEYK
MPLVQQILLNSKAGVEFNNILRAILRQDPDIIMIGEIRDEESLDIALKASLTGHLLLSTLHTNDAFSTIDRLLDMKAKAY
LIASALSLIIAQRLVRKLCPWCKQESQKSYAEFQGDFFEAKGCEYCHYSGFYGRELIAECLSIDEELSCAIRENKDKKTL
IELAKKQGFTSMFEQGLQKAKEGITSIDELFRLVR

Nucleotide

• Length: 1548 bp

>NTDB_id=728635 N3Z98_RS06570 WP_412766738.1 1297660..1299207(+) (ctsE) [Campylobacter hepaticus strain RBCL71delta]
ATGGAAGCAATTTTTCAAGCTTATATTAATGATAACATGAGTCTTGATCAAATTTGTAAGCAATGCTCTTGTAGTGTGGA
TGAATTTTTTCAAAAATTAGCCCATTTTTATAAGATTGATTTTATAGATTTAGATCAGTATGATCATTTTATTTATGAGA
ATATGCCCTTTTCTTTATTTGAAAAATTTAGATTTTTACTGATTGAAAATGCGAATGGGTTTTTAATCGTTAGGTCTAAA
CCTTGTTCTTTAGAACTCTTAGAACAAGTTAAAAATTTTGTATTTTGTGAAAATATGAGTATGGTTATTGCCAATGAGTT
AAAAATTACTAAAATTTTAAATCAAATTCGTATACAAGAAAAAATGAGTAAATTAAGCACTAAACTCAGGCTTGAGTGGC
AAGAAAAAGAAAAAAAAGATGATCAAAGTTGCATTAGTCAAATTTTTGATTTTTTACTCAATGAAATTTTACCTTTTAAT
GCTAGCGATATGCATATAGAAGCAAGAGCTGATGATGCTTTAATTAGATTTAGGGTTGATGGTATTTTGCATCAATTGCT
TGAGTGTCAAAAAGATGTTTATGAGGCTTTAGTTTTTTATATCAAATTTTTAGCTTGTTTAAATTTAGCCGAATCAAGAA
AGGCACAAGATGGGAGTTTTACATTAGATTTTAAAAATGAAAAATATGATTTTCGTGTTTCATGCTTGCCTTTGATTTAT
GGAGAGAGTATTGTAATAAGAATTTTAAAACACAATAAAGCAATTTTAGAATTAAACAAATTGAATTTGGGAGATAAGAA
TTTACAAATTGTCAAAAATACCCTAAAACGTTCCCATGGAATGATTTTATTAACAGGTCCTACAGGAAGTAGTAAAAGTA
CAACCTTATATGCTTGTTTAAATGCATTAAAAAGTATAGAGAAAAAAATTATTTCCGCAGAAGATCCTATAGAGTATAAA
ATGCCTTTAGTCCAACAAATTTTGCTTAATTCTAAAGCCGGGGTTGAATTTAATAATATCTTAAGAGCAATTTTAAGACA
GGATCCAGATATCATTATGATAGGGGAAATTCGTGACGAAGAAAGTCTTGATATAGCTTTAAAAGCATCTTTAACAGGAC
ATTTACTTTTAAGTACCTTGCATACTAATGATGCTTTTTCTACTATTGATAGGCTTTTGGATATGAAGGCAAAAGCTTAT
TTAATAGCTTCAGCCTTAAGTCTTATCATAGCCCAACGTTTAGTTAGAAAACTTTGTCCTTGGTGCAAGCAAGAAAGTCA
AAAATCTTATGCAGAATTTCAAGGAGATTTTTTTGAGGCTAAAGGATGTGAGTATTGTCATTATAGTGGATTTTATGGGA
GAGAATTGATTGCTGAGTGTTTAAGCATTGATGAAGAACTATCTTGTGCTATAAGGGAAAATAAGGATAAAAAAACCCTA
ATCGAACTTGCTAAAAAACAAGGTTTTACAAGTATGTTTGAACAAGGTTTGCAAAAAGCTAAAGAAGGTATTACTAGTAT
AGATGAACTTTTTAGGCTTGTAAGATGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (154-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ctsE	Campylobacter jejuni subsp. jejuni 81-176	76.311	100	0.763
pilB	Vibrio cholerae strain A1552	35.838	100	0.361