Detailed information NTG0726348

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: NYR30_RS12050
• Genome accession: NZ_CP103875
• Coordinates: 2522491..2523630 (+)
• Length: 379 a.a.
• NCBI ID: WP_302501230.1
• Uniprot ID: -
• Organism: Gallibacterium salpingitidis strain FC22
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2517491..2528630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYR30_RS12040 (NYR30_12035)	-	2519083..2521605 (+)	2523	WP_302501228.1	YadA family autotransporter adhesin	-
NYR30_RS12045 (NYR30_12040)	def	2521791..2522309 (-)	519	WP_302501229.1	peptide deformylase	-
NYR30_RS12050 (NYR30_12045)	dprA	2522491..2523630 (+)	1140	WP_302501230.1	DNA-processing protein DprA	Machinery gene
NYR30_RS12055 (NYR30_12050)	selB	2523634..2525475 (-)	1842	WP_066104131.1	selenocysteine-specific translation elongation factor	-
NYR30_RS12060 (NYR30_12055)	selA	2525472..2526863 (-)	1392	WP_066104129.1	L-seryl-tRNA(Sec) selenium transferase	-
NYR30_RS12070 (NYR30_12065)	-	2527123..2527650 (+)	528	WP_066104126.1	metallophosphoesterase	-
NYR30_RS12075 (NYR30_12070)	-	2527754..2528302 (-)	549	WP_066104123.1	flavodoxin family protein	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 41317.69 Da
• Isoelectric Point: 5.9749

>NTDB_id=726348 NYR30_RS12050 WP_302501230.1 2522491..2523630(+) (dprA) [Gallibacterium salpingitidis strain FC22]
MQTLITLLRLSLLPQFGATKIEQLLEQISLADLLAYDQTQLRHIGWTTTQINAWFSPNQRLIDELLAWQQQQHHQMITLL
DAQYPLLLRQTNAAPPILFVKGNINALSAPQIAVVGSRYCSPYGEHCAKTITSELAQAGLTITSGLALGIDGICHQAALL
NQGKSVAVLGCGLNTIYPARHQKLAQHILDTDGALVSELIPDTPPIPENFPRRNRIISGLSFGTLVIEASSKSGSLITAR
YALEQNREVFAVPGALDNPLSQGCHHLIKQGAWLVESGQDILEILAPQIAAVTPLIPSENTTISIKTTTKPTAPTTVIKP
DIPPEHQALYQQLNTATPISPDELAIALQCPIEQLLTDLLELEMLGVIQQIRGGYVRCY

Nucleotide

• Length: 1140 bp

>NTDB_id=726348 NYR30_RS12050 WP_302501230.1 2522491..2523630(+) (dprA) [Gallibacterium salpingitidis strain FC22]
ATGCAGACTTTAATAACTCTACTTCGTCTTAGTTTATTGCCGCAATTTGGTGCTACTAAAATCGAGCAATTATTAGAACA
GATTTCATTAGCTGATTTGCTAGCATACGATCAGACTCAATTACGTCATATTGGTTGGACAACAACGCAAATCAATGCTT
GGTTTTCGCCTAATCAACGGTTAATTGATGAATTACTTGCTTGGCAACAGCAACAACATCACCAGATGATTACTCTGCTC
GATGCGCAATACCCGCTGTTACTTCGTCAAACCAACGCAGCGCCGCCCATTTTGTTTGTCAAAGGTAACATTAATGCGTT
ATCTGCGCCACAAATCGCTGTCGTAGGCAGCCGCTATTGTTCGCCATATGGCGAGCATTGCGCTAAAACCATTACCAGTG
AACTCGCACAAGCAGGGCTTACCATTACCAGCGGTTTAGCGCTAGGTATTGACGGTATCTGCCACCAGGCGGCACTACTT
AATCAAGGAAAAAGCGTTGCGGTATTAGGTTGTGGTTTAAATACTATTTACCCTGCGCGCCATCAAAAATTAGCGCAGCA
TATTTTAGATACAGATGGCGCCTTAGTATCGGAACTGATTCCCGATACACCGCCCATTCCGGAAAACTTTCCACGTCGCA
ATCGTATTATTAGCGGGCTATCCTTTGGTACTTTAGTGATAGAAGCTTCGTCTAAAAGCGGTTCCTTAATTACTGCTCGC
TACGCATTAGAACAAAATCGTGAAGTTTTTGCTGTGCCAGGCGCGCTAGATAACCCATTGAGTCAAGGTTGTCACCATTT
AATTAAACAAGGCGCTTGGTTAGTGGAAAGCGGACAAGATATTTTAGAAATTTTGGCGCCGCAAATCGCTGCCGTAACGC
CTTTGATACCAAGCGAAAATACCACTATTAGTATCAAAACTACAACCAAACCCACTGCACCAACAACCGTAATCAAACCT
GATATTCCACCAGAACATCAAGCGCTTTATCAACAACTCAATACTGCTACACCTATATCGCCTGATGAATTAGCCATTGC
CTTGCAATGTCCAATTGAACAACTGTTAACGGATTTGCTGGAATTAGAAATGTTAGGTGTGATCCAACAAATCCGCGGTG
GTTATGTACGCTGCTATTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (70-276)

• DprA winged helix domain (DprA_WH) (319-374)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	50.39	100	0.512
dprA	Haemophilus influenzae Rd KW20	52.059	89.71	0.467
dprA	Vibrio campbellii strain DS40M4	46.4	98.945	0.459
dprA	Vibrio cholerae strain A1552	41.689	100	0.417
dprA	Legionella pneumophila strain ERS1305867	37.565	100	0.383
dprA	Acinetobacter baumannii D1279779	41.916	88.127	0.369
dprA	Acinetobacter baumannii strain A118	42.424	87.071	0.369