Detailed information NTG0724604

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: NYR93_RS02995
• Genome accession: NZ_CP103769
• Coordinates: 573869..574483 (+)
• Length: 204 a.a.
• NCBI ID: WP_043867297.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain ML61
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 568869..579483

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYR93_RS02960 (NYR93_02960)	aroE	569556..570398 (+)	843	WP_003152856.1	shikimate dehydrogenase	-
NYR93_RS02965 (NYR93_02965)	yhbY	570392..570682 (+)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-
NYR93_RS02970 (NYR93_02970)	-	570693..571262 (+)	570	WP_003152860.1	nicotinate-nucleotide adenylyltransferase	-
NYR93_RS02975 (NYR93_02975)	yqeK	571252..571833 (+)	582	WP_003152863.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
NYR93_RS02980 (NYR93_02980)	rsfS	571830..572186 (+)	357	WP_239819198.1	ribosome silencing factor	-
NYR93_RS02985 (NYR93_02985)	-	572183..572920 (+)	738	WP_014305450.1	class I SAM-dependent methyltransferase	-
NYR93_RS02990 (NYR93_02990)	comER	572989..573810 (-)	822	WP_115996552.1	late competence protein ComER	-
NYR93_RS02995 (NYR93_02995)	comEA	573869..574483 (+)	615	WP_043867297.1	helix-hairpin-helix domain-containing protein	Machinery gene
NYR93_RS03000 (NYR93_03000)	-	574550..575119 (+)	570	WP_003152868.1	ComE operon protein 2	-
NYR93_RS03005 (NYR93_03005)	comEC	575120..577471 (+)	2352	WP_239819197.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NYR93_RS03010 (NYR93_03010)	-	577490..577624 (-)	135	WP_003152870.1	YqzM family protein	-
NYR93_RS03015 (NYR93_03015)	-	577665..577819 (+)	155	Protein_579	hypothetical protein	-
NYR93_RS03020 (NYR93_03020)	holA	577859..578900 (+)	1042	Protein_580	DNA polymerase III subunit delta	-
NYR93_RS03025 (NYR93_03025)	rpsT	578917..579183 (-)	267	WP_003152876.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22178.37 Da
• Isoelectric Point: 6.9685

>NTDB_id=724604 NYR93_RS02995 WP_043867297.1 573869..574483(+) (comEA) [Bacillus velezensis strain ML61]
MTKAMMTERMRRNLKILGACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTADDKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEGNHPKTAVGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMKVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=724604 NYR93_RS02995 WP_043867297.1 573869..574483(+) (comEA) [Bacillus velezensis strain ML61]
ATGACGAAAGCGATGATGACGGAGCGGATGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGCGGCAGGGGCAGTTTT
TATCTGTATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCCGTGCTCGGTCAAACAGCCTCCGCAT
CCGTCGCGGACAAAAAAGACACCGCAGACGATAAGATTATGATTGATGTGAAAGGAGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGAGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGGGAATCATCCGAAAACAG
CAGTTGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCGATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCCATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAAGGTATC
AGGCTTTGGAGAAAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-202)

• SLBB domain (SLBB) (68-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.854	94.118	0.554
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	36.019	100	0.373
comEA/celA/cilE	Streptococcus mitis SK321	35.545	100	0.368
comEA	Latilactobacillus sakei subsp. sakei 23K	31.897	100	0.363
comEA/celA/cilE	Streptococcus pneumoniae R6	35.749	100	0.363
comEA/celA/cilE	Streptococcus mitis NCTC 12261	35.749	100	0.363
comEA/celA/cilE	Streptococcus pneumoniae D39	35.749	100	0.363
comEA/celA/cilE	Streptococcus pneumoniae Rx1	35.749	100	0.363