Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG/cglG   Type   Machinery gene
Locus tag   PUW70_RS01175 Genome accession   NZ_CP118029
Coordinates   209666..209992 (+) Length   108 a.a.
NCBI ID   WP_257360478.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI68     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 204666..214992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW70_RS01140 (PUW70_01140) - 205957..206322 (+) 366 WP_024053131.1 DUF1033 family protein -
  PUW70_RS01145 (PUW70_01145) comGA 206392..207333 (+) 942 WP_024053130.1 competence type IV pilus ATPase ComGA Machinery gene
  PUW70_RS01150 (PUW70_01150) comGB 207275..208297 (+) 1023 WP_171021869.1 competence type IV pilus assembly protein ComGB Machinery gene
  PUW70_RS01155 (PUW70_01155) comGC 208294..208611 (+) 318 WP_003028473.1 competence type IV pilus major pilin ComGC Machinery gene
  PUW70_RS01160 (PUW70_01160) comGD 208601..208999 (+) 399 WP_022525973.1 competence type IV pilus minor pilin ComGD Machinery gene
  PUW70_RS01165 (PUW70_01165) comGE/cglE 208971..209264 (+) 294 WP_024053127.1 competence type IV pilus minor pilin ComGE Machinery gene
  PUW70_RS01170 (PUW70_01170) comGF/cglF 209248..209685 (+) 438 WP_024053126.1 competence type IV pilus minor pilin ComGF Machinery gene
  PUW70_RS01175 (PUW70_01175) comGG/cglG 209666..209992 (+) 327 WP_257360478.1 competence type IV pilus minor pilin ComGG Machinery gene
  PUW70_RS01180 (PUW70_01180) comGH 210064..211017 (+) 954 WP_024053125.1 class I SAM-dependent methyltransferase Machinery gene
  PUW70_RS01185 (PUW70_01185) - 211064..212263 (+) 1200 WP_024053124.1 acetate kinase -
  PUW70_RS01190 (PUW70_01190) glmS 212658..214472 (+) 1815 WP_024053123.1 glutamine--fructose-6-phosphate transaminase (isomerizing) -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12833.96 Da        Isoelectric Point: 10.6713

>NTDB_id=720331 PUW70_RS01175 WP_257360478.1 209666..209992(+) (comGG/cglG) [Streptococcus anginosus strain VSI68]
MWKQKVKAGIMLYALFMAAVFSLLLQFYLQRQTANHRNFTLNRERTQAYAMALLANENSKQREFDKGYVQDQKSEKELIL
TVTMKTGHRYQFSFSAKKEKQMDKKLNK

Nucleotide


Download         Length: 327 bp        

>NTDB_id=720331 PUW70_RS01175 WP_257360478.1 209666..209992(+) (comGG/cglG) [Streptococcus anginosus strain VSI68]
GTGTGGAAACAGAAAGTTAAAGCGGGCATTATGCTCTATGCACTCTTTATGGCGGCAGTTTTTAGCTTGCTTTTGCAATT
TTACCTTCAGCGTCAAACTGCTAATCATAGAAATTTCACCCTAAACCGAGAACGAACACAGGCTTATGCAATGGCTCTTC
TAGCCAACGAAAATTCTAAGCAAAGGGAATTTGATAAAGGGTATGTCCAAGACCAAAAGAGTGAGAAAGAGCTCATCCTG
ACAGTAACAATGAAGACTGGTCACCGTTATCAATTTTCTTTTTCGGCTAAAAAAGAAAAGCAGATGGATAAAAAATTGAA
TAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis NCTC 12261

47.059

94.444

0.444
  comGG/cglG Streptococcus mitis SK321

43.137

94.444

0.407
  comGG/cglG Streptococcus pneumoniae TIGR4

41.584

93.519

0.389
  comGG/cglG Streptococcus pneumoniae D39

41.584

93.519

0.389
  comGG/cglG Streptococcus pneumoniae R6

41.584

93.519

0.389
  comGG/cglG Streptococcus pneumoniae Rx1

41.584

93.519

0.389
  comGG Streptococcus mutans UA159

39.806

95.37

0.38
  comGG Streptococcus mutans UA140

39.806

95.37

0.38