Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   NW961_RS05815 Genome accession   NZ_CP102955
Coordinates   1210739..1211611 (+) Length   290 a.a.
NCBI ID   WP_258413335.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 28-G-I     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1205739..1216611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW961_RS05795 (NW961_05795) sucC 1205854..1207020 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  NW961_RS05800 (NW961_05800) sucD 1207042..1207950 (+) 909 WP_000110253.1 succinate--CoA ligase subunit alpha -
  NW961_RS05805 (NW961_05805) - 1208177..1209295 (+) 1119 WP_258412036.1 LysM peptidoglycan-binding domain-containing protein -
  NW961_RS05810 (NW961_05810) fmhC 1209323..1210567 (+) 1245 WP_000672869.1 FemA/FemB family glycyltransferase FmhC -
  NW961_RS05815 (NW961_05815) dprA 1210739..1211611 (+) 873 WP_258413335.1 DNA-processing protein DprA Machinery gene
  NW961_RS05820 (NW961_05820) topA 1211785..1213860 (+) 2076 WP_001557331.1 type I DNA topoisomerase -
  NW961_RS05825 (NW961_05825) trmFO 1214016..1215323 (+) 1308 WP_000195259.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33623.02 Da        Isoelectric Point: 9.6913

>NTDB_id=720328 NW961_RS05815 WP_258413335.1 1210739..1211611(+) (dprA) [Staphylococcus aureus strain 28-G-I]
MIRLFLLKLYWSHFSTKQIHQFLMAYPNVIKEGGRKKDSYLFEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYRGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=720328 NW961_RS05815 WP_258413335.1 1210739..1211611(+) (dprA) [Staphylococcus aureus strain 28-G-I]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGTCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATTTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAGAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

97.931

100

0.979
  dprA Staphylococcus aureus N315

97.586

100

0.976