Detailed information NTG0714303

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: NQZ84_RS06875
• Genome accession: NZ_CP102094
• Coordinates: 1403486..1404439 (-)
• Length: 317 a.a.
• NCBI ID: WP_257048379.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 12RC1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1398486..1409439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ84_RS06845 (NQZ84_06845)	-	1399078..1399797 (-)	720	WP_044671062.1	O-methyltransferase	-
NQZ84_RS06850 (NQZ84_06850)	-	1399872..1400420 (-)	549	WP_024385841.1	DUF6630 family protein	-
NQZ84_RS06855 (NQZ84_06855)	-	1400431..1400874 (-)	444	WP_014637769.1	hypothetical protein	-
NQZ84_RS06860 (NQZ84_06860)	pepF	1400876..1402678 (-)	1803	WP_074414178.1	oligoendopeptidase F	Regulator
NQZ84_RS06865 (NQZ84_06865)	HI0659	1402788..1403087 (-)	300	WP_044670992.1	helix-turn-helix domain-containing protein	Machinery gene
NQZ84_RS06870 (NQZ84_06870)	-	1403077..1403442 (-)	366	WP_172107642.1	type II toxin-antitoxin system RelE/ParE family toxin	-
NQZ84_RS06875 (NQZ84_06875)	coiA	1403486..1404439 (-)	954	WP_257048379.1	competence protein CoiA	Machinery gene
NQZ84_RS06880 (NQZ84_06880)	metG	1404500..1406503 (-)	2004	WP_257048381.1	methionine--tRNA ligase	-
NQZ84_RS06885 (NQZ84_06885)	-	1406616..1407008 (-)	393	WP_257048383.1	hypothetical protein	-
NQZ84_RS06890 (NQZ84_06890)	-	1407091..1407231 (+)	141	WP_257048385.1	hypothetical protein	-
NQZ84_RS06895 (NQZ84_06895)	-	1407207..1407656 (-)	450	WP_257048387.1	hypothetical protein	-
NQZ84_RS06900 (NQZ84_06900)	-	1407710..1408330 (-)	621	WP_257048389.1	DUF3885 domain-containing protein	-
NQZ84_RS06905 (NQZ84_06905)	-	1408453..1409328 (+)	876	WP_172078499.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 36786.51 Da
• Isoelectric Point: 8.2856

>NTDB_id=714303 NQZ84_RS06875 WP_257048379.1 1403486..1404439(-) (coiA) [Streptococcus suis strain 12RC1]
MLVALDEDGQVFNVLENPAPQGRYSCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFFENESAQHLSLKSCLYSWLINAEQ
VELEKCLPSIGQVADLFVNNSLALEVQCSSLPISRLQLRTQAYHEAGLQVLWLLGKGLWIKERLSKLHKQFLSFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLDILRLPFAKQALSHLTCPLDRDLPRYIAQQLYYKSPNWL
ALQAESYSRGENLLTKTAEEWYPHIRLPRSAIGFAQIQKDLTLVYQTFEHYYAEVKDKRIQAVYPPAVYWKISRIKE

Nucleotide

• Length: 954 bp

>NTDB_id=714303 NQZ84_RS06875 WP_257048379.1 1403486..1404439(-) (coiA) [Streptococcus suis strain 12RC1]
ATGTTAGTTGCACTTGATGAAGATGGACAAGTTTTTAATGTCTTGGAAAATCCTGCGCCGCAAGGTCGCTATTCTTGTCC
AGGTTGTGGAGGACTGGTCCGATACAAATCCGGAAAAGTTCTGCGTTCGCACTTTGCCCATGTAACCCTGCGGGACTGCC
ACTATTTTTTCGAGAATGAGTCAGCCCAGCATCTGTCACTTAAGTCTTGTCTGTACAGTTGGTTAATCAATGCCGAACAA
GTTGAACTTGAAAAATGCCTACCTAGTATAGGGCAGGTCGCTGATTTATTTGTTAATAATAGTCTAGCTTTGGAAGTCCA
ATGTTCCAGTCTGCCAATTTCTCGTTTGCAGCTGAGGACGCAAGCCTATCATGAAGCTGGTCTTCAGGTTCTCTGGTTGT
TGGGAAAAGGCCTATGGATAAAAGAAAGATTAAGTAAATTACACAAGCAATTTCTCTCTTTTAGTATGAACATGGGTTTT
CACCTCTGGGAATTGGATGATGAGAAAAAGGAATTACGACTTCGCTACCTCATTCATGAAGACTTACGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTGGACATCTTGCGTCTGCCATTTGCCAAGCAAGCTTTAT
CGCATCTTACTTGCCCGTTAGATAGGGATTTGCCTCGCTACATTGCTCAACAGCTTTATTACAAATCCCCCAATTGGTTA
GCCCTGCAGGCAGAGTCTTATAGCCGAGGGGAGAATTTGCTGACAAAGACGGCAGAAGAATGGTACCCACATATCCGTCT
GCCCCGCTCTGCCATTGGCTTTGCCCAAATACAAAAAGATTTAACCCTAGTTTATCAGACCTTTGAACACTATTATGCGG
AGGTCAAGGACAAGCGGATACAAGCGGTTTATCCACCAGCAGTTTATTGGAAAATAAGTAGAATAAAAGAATGA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (21-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	53.226	97.792	0.521
coiA	Streptococcus pneumoniae TIGR4	51.613	97.792	0.505
coiA	Streptococcus pneumoniae Rx1	51.613	97.792	0.505
coiA	Streptococcus pneumoniae D39	51.613	97.792	0.505
coiA	Streptococcus pneumoniae R6	51.613	97.792	0.505
coiA	Lactococcus lactis subsp. cremoris KW2	40.938	100	0.413