Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   NQZ84_RS06865 Genome accession   NZ_CP102094
Coordinates   1402788..1403087 (-) Length   99 a.a.
NCBI ID   WP_044670992.1    Uniprot ID   A0A0Z8BYX8
Organism   Streptococcus suis strain 12RC1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1397788..1408087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ84_RS06840 (NQZ84_06840) prsA 1398015..1399016 (-) 1002 WP_024408714.1 peptidylprolyl isomerase PrsA -
  NQZ84_RS06845 (NQZ84_06845) - 1399078..1399797 (-) 720 WP_044671062.1 O-methyltransferase -
  NQZ84_RS06850 (NQZ84_06850) - 1399872..1400420 (-) 549 WP_024385841.1 DUF6630 family protein -
  NQZ84_RS06855 (NQZ84_06855) - 1400431..1400874 (-) 444 WP_014637769.1 hypothetical protein -
  NQZ84_RS06860 (NQZ84_06860) pepF 1400876..1402678 (-) 1803 WP_074414178.1 oligoendopeptidase F Regulator
  NQZ84_RS06865 (NQZ84_06865) HI0659 1402788..1403087 (-) 300 WP_044670992.1 helix-turn-helix domain-containing protein Machinery gene
  NQZ84_RS06870 (NQZ84_06870) - 1403077..1403442 (-) 366 WP_172107642.1 type II toxin-antitoxin system RelE/ParE family toxin -
  NQZ84_RS06875 (NQZ84_06875) coiA 1403486..1404439 (-) 954 WP_257048379.1 competence protein CoiA Machinery gene
  NQZ84_RS06880 (NQZ84_06880) metG 1404500..1406503 (-) 2004 WP_257048381.1 methionine--tRNA ligase -
  NQZ84_RS06885 (NQZ84_06885) - 1406616..1407008 (-) 393 WP_257048383.1 hypothetical protein -
  NQZ84_RS06890 (NQZ84_06890) - 1407091..1407231 (+) 141 WP_257048385.1 hypothetical protein -
  NQZ84_RS06895 (NQZ84_06895) - 1407207..1407656 (-) 450 WP_257048387.1 hypothetical protein -

Sequence

Protein


Download         Length: 99 a.a.        Molecular weight: 11044.70 Da        Isoelectric Point: 7.2059

>NTDB_id=714302 NQZ84_RS06865 WP_044670992.1 1402788..1403087(-) (HI0659) [Streptococcus suis strain 12RC1]
MENSAIGSNWQSVRSELFSEKEIIESDLRVAIMSELIKARHEQGVSQKRLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLKQERHFQ

Nucleotide


Download         Length: 300 bp        

>NTDB_id=714302 NQZ84_RS06865 WP_044670992.1 1402788..1403087(-) (HI0659) [Streptococcus suis strain 12RC1]
ATGGAAAATAGTGCAATTGGTAGTAACTGGCAATCGGTACGGTCTGAACTCTTCAGTGAGAAGGAAATCATAGAAAGTGA
TTTGCGTGTGGCAATTATGAGCGAACTGATAAAAGCAAGGCATGAACAGGGAGTAAGTCAGAAAAGACTAGAGGAGCTAA
GCGGGGTGAGTCAACCAGTTATTGCAAGAATGGAAACAGGTAAAACTAGTCCACAATTGGACACTGTCTTGAAGGTATTG
GCTAGTCTGGGAAAAACTTTAGCAGTTGTGCCTTTGAAACAGGAACGACATTTTCAATAG

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(38-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Z8BYX8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

58.889

90.909

0.535