Detailed information NTG0713531

Bioinformatically predicted

Overview

• Name: comYF
• Type: Machinery gene
• Locus tag: NPS18_RS09175
• Genome accession: NZ_CP101984
• Coordinates: 1853078..1853512 (-)
• Length: 144 a.a.
• NCBI ID: WP_002263440.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain UA-159
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1848078..1858512

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NPS18_RS09145 (NPS18_09145)	-	1848507..1849169 (-)	663	WP_002263446.1	type II CAAX endopeptidase family protein	-
NPS18_RS09150 (NPS18_09150)	-	1849222..1849662 (-)	441	WP_002263445.1	hypothetical protein	-
NPS18_RS09155 (NPS18_09155)	-	1849631..1849876 (-)	246	WP_002263444.1	helix-turn-helix transcriptional regulator	-
NPS18_RS09160 (NPS18_09160)	-	1850445..1851644 (-)	1200	WP_002263443.1	acetate kinase	-
NPS18_RS09165 (NPS18_09165)	comYH	1851703..1852656 (-)	954	WP_002263442.1	class I SAM-dependent methyltransferase	Machinery gene
NPS18_RS09170 (NPS18_09170)	comYG	1852711..1853100 (-)	390	WP_002263441.1	competence type IV pilus minor pilin ComGG	Machinery gene
NPS18_RS09175 (NPS18_09175)	comYF	1853078..1853512 (-)	435	WP_002263440.1	competence type IV pilus minor pilin ComGF	Machinery gene
NPS18_RS09180 (NPS18_09180)	comYE	1853499..1853792 (-)	294	WP_002263439.1	competence type IV pilus minor pilin ComGE	Machinery gene
NPS18_RS09185 (NPS18_09185)	comYD	1853764..1854168 (-)	405	WP_002263438.1	competence type IV pilus minor pilin ComGD	Machinery gene
NPS18_RS09190 (NPS18_09190)	comYC	1854155..1854469 (-)	315	WP_002263437.1	competence type IV pilus major pilin ComGC	Machinery gene
NPS18_RS09195 (NPS18_09195)	comYB	1854469..1855500 (-)	1032	WP_255262721.1	competence type IV pilus assembly protein ComGB	Machinery gene
NPS18_RS09200 (NPS18_09200)	comYA	1855436..1856377 (-)	942	WP_002263435.1	competence type IV pilus ATPase ComGA	Machinery gene
NPS18_RS09205 (NPS18_09205)	-	1856507..1856890 (-)	384	WP_002263434.1	DUF1033 family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16266.75 Da
• Isoelectric Point: 9.9512

>NTDB_id=713531 NPS18_RS09175 WP_002263440.1 1853078..1853512(-) (comYF) [Streptococcus mutans strain UA-159]
MLKSKLKAFTLLECLLALLVIAGSVSVYNGLTKAISSNIHYLSKNQEDAWLLFCQQFRSELEGTTLQKLDSNKLYIQKNN
QSLAFGKSKASDFRKTNSDGRGYQPMLTEIKAANFSQSGKIIKLDLTFKDGLERTFVYAFHEKN

Nucleotide

• Length: 435 bp

>NTDB_id=713531 NPS18_RS09175 WP_002263440.1 1853078..1853512(-) (comYF) [Streptococcus mutans strain UA-159]
TTGTTAAAAAGTAAATTGAAAGCTTTCACACTTTTAGAGTGTCTCCTTGCTTTGCTTGTCATTGCTGGTAGTGTATCTGT
TTATAATGGTCTAACTAAAGCTATTAGTAGTAATATTCATTACTTATCAAAAAATCAAGAAGATGCTTGGTTACTTTTTT
GTCAGCAATTTCGGTCTGAACTTGAAGGAACGACTTTGCAAAAATTGGATAGCAATAAGCTTTATATTCAAAAAAATAAT
CAAAGTTTAGCCTTTGGTAAATCAAAAGCAAGTGATTTTAGAAAGACTAACAGTGATGGACGTGGTTATCAGCCTATGTT
GACGGAGATCAAAGCTGCTAATTTTAGTCAATCAGGAAAAATTATTAAATTAGACCTTACTTTCAAAGATGGTTTAGAAA
GGACTTTTGTTTATGCTTTTCATGAAAAAAATTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (36-133)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYF	Streptococcus mutans UA159	100	100	1
comYF	Streptococcus mutans UA140	99.306	100	0.993
comGF	Lactococcus lactis subsp. cremoris KW2	43.262	97.917	0.424
comGF/cglF	Streptococcus pneumoniae Rx1	40.299	93.056	0.375
comGF/cglF	Streptococcus pneumoniae D39	40.299	93.056	0.375
comGF/cglF	Streptococcus pneumoniae R6	40.299	93.056	0.375
comGF/cglF	Streptococcus pneumoniae TIGR4	40.299	93.056	0.375
comGF/cglF	Streptococcus mitis NCTC 12261	38.806	93.056	0.361