Detailed information NTG0713530

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: PPM30_RS07260
• Genome accession: NZ_CP116868
• Coordinates: 1387364..1388389 (+)
• Length: 341 a.a.
• NCBI ID: WP_003245451.1
• Uniprot ID: O34470
• Organism: Bacillus subtilis subsp. subtilis strain MGP003
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1382364..1393389

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PPM30_RS07225	ylbE	1382664..1382903 (+)	240	WP_003232231.1	YlbE-like family protein	-
PPM30_RS07230	ylbF	1383019..1383468 (+)	450	WP_003221370.1	regulatory iron-sulfur-containing complex subunit RicF	Regulator
PPM30_RS07235	ylbG	1383523..1383795 (+)	273	WP_009967171.1	YlbG family protein	-
PPM30_RS07240	rsmD	1384118..1384672 (+)	555	WP_003232227.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PPM30_RS07245	coaD	1384677..1385162 (+)	486	WP_003245283.1	pantetheine-phosphate adenylyltransferase	-
PPM30_RS07250	spoVV	1385173..1386399 (-)	1227	WP_003245492.1	dipicolinic acid transporter SpoVV	-
PPM30_RS07255	ylbK	1386580..1387362 (+)	783	WP_003232221.1	patatin family protein	-
PPM30_RS07260	sepM	1387364..1388389 (+)	1026	WP_003245451.1	protease DdcP	Regulator
PPM30_RS07265	tmcAL	1388406..1389653 (-)	1248	WP_003244707.1	nucleotidyltransferase	-
PPM30_RS07270	-	1389650..1389835 (-)	186	WP_003232215.1	hypothetical protein	-
PPM30_RS07275	ylbN	1389863..1390381 (+)	519	WP_003232214.1	YceD family protein	-
PPM30_RS07280	rpmF	1390403..1390582 (+)	180	WP_003154457.1	50S ribosomal protein L32	-
PPM30_RS07285	gerR	1390728..1391309 (+)	582	WP_003232210.1	sporulation specific transcriptional regulator GerR	-
PPM30_RS07290	ylbP	1391366..1391848 (-)	483	WP_003244940.1	N-acetyltransferase	-
PPM30_RS07295	panEA	1392008..1392904 (+)	897	WP_003232206.1	2-dehydropantoate 2-reductase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37651.23 Da
• Isoelectric Point: 6.5347

>NTDB_id=713530 PPM30_RS07260 WP_003245451.1 1387364..1388389(+) (sepM) [Bacillus subtilis subsp. subtilis strain MGP003]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST

Nucleotide

• Length: 1026 bp

>NTDB_id=713530 PPM30_RS07260 WP_003245451.1 1387364..1388389(+) (sepM) [Bacillus subtilis subsp. subtilis strain MGP003]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-331)

• Peptidase family M50 (Peptidase_M50) (59-220)

• PDZ domain (PDZ_2) (128-195)

3D structure

• PDB: 2KJP

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	39.143	100	0.402