Detailed information NTG0070551

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: EL386_RS14310
• Genome accession: NZ_AP018725
• Coordinates: 2859022..2860218 (+)
• Length: 398 a.a.
• NCBI ID: WP_126456901.1
• Uniprot ID: -
• Organism: Sulfuriflexus mobilis strain aks1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2854022..2865218

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL386_RS14295	-	2854600..2854800 (-)	201	WP_126456899.1	zinc-finger domain-containing protein	-
EL386_RS14300	-	2854877..2855791 (-)	915	WP_126457383.1	branched-chain amino acid transaminase	-
EL386_RS14305	glnE	2855981..2858890 (-)	2910	WP_126456900.1	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	-
EL386_RS14310	pilU	2859022..2860218 (+)	1197	WP_126456901.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
EL386_RS14315	-	2860959..2862431 (-)	1473	WP_126456902.1	hypothetical protein	-
EL386_RS14320	-	2862692..2863240 (+)	549	WP_126456903.1	RNA polymerase sigma factor	-
EL386_RS14325	-	2863237..2863956 (+)	720	WP_126456904.1	DsrE family protein	-

Sequence

Protein

• Length: 398 a.a.
• Molecular weight: 43852.82 Da
• Isoelectric Point: 4.9512

>NTDB_id=70551 EL386_RS14310 WP_126456901.1 2859022..2860218(+) (pilU) [Sulfuriflexus mobilis strain aks1]
MEFKDYLKIMVMKDASDLYLAAGAPPSAKFHGSLKAMEQKTLTGQDVKDIAYAIMDEGQIAEFEAKPEMNLALSLSGVGR
FRVNIFKQRNNLSMVIRNIKTDIPHFEDLGLPPIMKKIIMTKRGLVLFVGATGSGKSTSLASLIDHRNTNSAGHIITIED
PIEFVHQHKKSIVNQREVGVDTDSYADALKNTLRQAPDVILIGEIRDRETMEHALAFAETGHLAISTLHANNANQALDRI
INFFPEERRNQLLNDLSMNLQAFISQRLIPTVDGKRCAAIEILLGTPLVRDTIKRGEIGELKEIMSKSANIGMQTFDHAL
YELFKTGKISEEEALRNADSANNLRLRINLADEQRDDNAAGAGLSLVDDEPGEEEAPATGGPASFSLEDIPSDEETTS

Nucleotide

• Length: 1197 bp

>NTDB_id=70551 EL386_RS14310 WP_126456901.1 2859022..2860218(+) (pilU) [Sulfuriflexus mobilis strain aks1]
ATGGAGTTTAAGGACTATTTGAAGATCATGGTCATGAAGGATGCCTCGGACCTGTACCTGGCCGCCGGTGCCCCGCCTTC
GGCCAAATTCCATGGCTCACTCAAGGCCATGGAGCAAAAGACCCTGACCGGCCAGGATGTCAAAGACATTGCCTATGCGA
TCATGGATGAAGGCCAGATCGCCGAATTTGAGGCCAAGCCGGAGATGAACCTGGCCCTGTCACTATCCGGAGTCGGCCGT
TTTCGCGTCAATATCTTCAAACAGCGCAATAACCTGTCGATGGTGATCCGCAACATCAAGACCGATATCCCGCACTTTGA
AGACCTCGGCCTGCCGCCGATCATGAAAAAGATCATCATGACCAAACGTGGCTTGGTGTTGTTTGTCGGTGCCACGGGTT
CCGGTAAATCGACCTCGCTAGCCTCGCTCATTGATCACCGCAACACCAACAGCGCCGGGCACATCATTACCATCGAAGAC
CCGATCGAATTTGTGCACCAGCATAAAAAGAGCATCGTCAACCAGCGTGAGGTCGGTGTCGATACCGACAGTTATGCCGA
CGCACTGAAAAACACCCTGCGCCAGGCCCCGGATGTGATCCTGATTGGTGAGATCCGTGACCGCGAGACCATGGAACACG
CACTGGCCTTCGCCGAAACCGGCCACCTCGCCATCTCGACCCTGCACGCCAACAATGCCAACCAGGCACTCGATCGTATT
ATCAATTTCTTCCCGGAAGAGCGTCGTAACCAGTTACTCAATGACCTGTCCATGAACCTGCAGGCCTTTATCTCACAGCG
CCTGATCCCGACCGTGGATGGCAAGCGCTGTGCCGCCATCGAGATCCTGCTCGGTACACCGCTGGTACGCGACACCATCA
AGCGTGGTGAGATCGGCGAACTTAAGGAGATCATGAGCAAGTCCGCCAACATCGGCATGCAGACCTTCGACCACGCCCTC
TATGAACTGTTCAAGACCGGCAAGATTAGTGAGGAAGAGGCCCTGCGCAATGCCGACTCTGCCAACAACCTGCGTCTGCG
CATCAACCTTGCGGATGAACAGCGTGATGATAACGCGGCCGGTGCCGGCCTGAGTCTGGTCGATGACGAACCTGGAGAAG
AAGAGGCACCAGCCACTGGCGGACCGGCTAGCTTTAGCCTTGAGGATATACCCAGCGATGAAGAAACTACTAGCTAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (78-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.029	94.724	0.54
pilU	Acinetobacter baylyi ADP1	55.775	89.196	0.497
pilU	Vibrio cholerae strain A1552	53.168	91.206	0.485
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.669	97.236	0.425
pilT	Legionella pneumophila strain Lp02	43.114	83.92	0.362
pilT	Legionella pneumophila strain ERS1305867	43.114	83.92	0.362