Detailed information NTG0070540

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: EL386_RS03705
• Genome accession: NZ_AP018725
• Coordinates: 715413..716798 (-)
• Length: 461 a.a.
• NCBI ID: WP_126453552.1
• Uniprot ID: -
• Organism: Sulfuriflexus mobilis strain aks1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 710413..721798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL386_RS03685	pilB	711410..713125 (-)	1716	WP_172597607.1	type IV-A pilus assembly ATPase PilB	Machinery gene
EL386_RS03690	pilE	713427..713912 (-)	486	WP_126453548.1	pilin	Machinery gene
EL386_RS15925	-	714285..714338 (-)	54	WP_420856730.1	hypothetical protein	-
EL386_RS03700	-	714555..715322 (+)	768	WP_126453550.1	hypothetical protein	-
EL386_RS03705	pilR	715413..716798 (-)	1386	WP_126453552.1	sigma-54-dependent transcriptional regulator	Regulator
EL386_RS03710	-	716807..718432 (-)	1626	WP_126453554.1	sensor histidine kinase	-
EL386_RS03715	-	718464..718697 (-)	234	WP_126453556.1	PP0621 family protein	-
EL386_RS03720	sucC	718801..719973 (+)	1173	WP_126453558.1	ADP-forming succinate--CoA ligase subunit beta	-
EL386_RS03725	sucD	719970..720845 (+)	876	WP_126453560.1	succinate--CoA ligase subunit alpha	-

Sequence

Protein

• Length: 461 a.a.
• Molecular weight: 50116.46 Da
• Isoelectric Point: 5.0551

>NTDB_id=70540 EL386_RS03705 WP_126453552.1 715413..716798(-) (pilR) [Sulfuriflexus mobilis strain aks1]
MDRYLALIVDDEPDILELLEMTLSRMDIDCQSAADIATAKQLLSQYDFDLCLTDMRLPDGDGIDLVRYMQQGHANIPVAM
ITAHGNMELAITALKAGAFDFVSKPVDLGVLRNLVNTALRLSHKAGDQPGTKTASAPPADTSQELLGESASIQRTRETIK
KLARSQAPVYISGESGSGKELVARLVHELGPRAAKPFVPVNCGAIPQDLMESEFFGHKKGSFTGAVSDKTGLFQAAEGGT
LFLDEVAELPLHMQVKLLRAIQEKSVRPVGEQHEAPIDVRILSATHKDLAALVSEGSFRQDLYYRINVIQLPVPSLRERK
DDIPLLAAHILGKLAGEMGTAPPRLSADALDALAGYAFPGNVRELENILERAMTLCEGDRINAGDLHLPTAMPEATVAGL
GLPTTEMHGDQPLEDYLDSIEKDAILQALEQTRFNKTAAAKKLGITFRALRYRLKKLGLEE

Nucleotide

• Length: 1386 bp

>NTDB_id=70540 EL386_RS03705 WP_126453552.1 715413..716798(-) (pilR) [Sulfuriflexus mobilis strain aks1]
ATGGACAGATACCTCGCCCTGATCGTCGACGACGAACCGGATATCCTCGAACTGCTAGAGATGACCCTGTCGCGCATGGA
CATCGATTGCCAGAGTGCCGCGGATATCGCGACCGCCAAACAACTCCTCAGCCAATACGACTTTGACCTCTGCCTGACCG
ACATGCGCCTGCCCGATGGCGACGGCATCGACCTGGTCCGCTACATGCAACAGGGCCACGCCAATATCCCGGTGGCCATG
ATCACCGCCCACGGCAATATGGAACTGGCGATCACCGCGCTCAAGGCCGGGGCCTTTGACTTTGTCTCCAAACCCGTCGA
CCTCGGCGTGTTGCGCAACCTGGTCAACACCGCCCTGCGGCTCTCGCACAAAGCCGGCGACCAGCCGGGCACGAAGACGG
CCAGCGCCCCGCCCGCCGACACGAGCCAGGAATTACTCGGTGAGTCGGCCTCGATTCAACGCACCCGTGAGACCATTAAA
AAGCTCGCCCGCAGCCAGGCACCGGTGTACATCAGCGGTGAATCCGGCAGCGGCAAGGAACTCGTCGCCCGCCTCGTGCA
CGAACTCGGCCCGCGCGCCGCCAAACCCTTTGTACCGGTCAACTGTGGCGCCATCCCGCAGGACCTCATGGAGAGCGAGT
TCTTCGGCCACAAAAAGGGCAGTTTCACCGGCGCGGTCAGCGACAAGACCGGCCTGTTCCAGGCCGCCGAGGGCGGTACG
CTATTTTTAGACGAGGTCGCCGAGTTGCCGCTGCACATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAATCCGTGCG
CCCGGTCGGCGAACAACACGAGGCCCCGATCGATGTGCGCATCCTCAGCGCCACCCACAAGGACCTCGCCGCGCTGGTCA
GCGAAGGCAGCTTCCGCCAGGATTTATACTACCGCATCAATGTCATCCAGCTGCCCGTACCCAGCCTGCGCGAACGCAAA
GATGATATCCCGCTGCTCGCCGCACACATCCTTGGCAAGCTGGCTGGCGAGATGGGCACAGCCCCCCCGCGACTCAGCGC
GGACGCCCTCGATGCCCTGGCCGGTTATGCCTTCCCCGGCAACGTGCGTGAACTGGAGAATATCCTCGAACGCGCCATGA
CCCTCTGCGAGGGCGATCGCATTAACGCCGGCGACCTGCACCTGCCCACGGCCATGCCCGAGGCGACCGTGGCCGGGCTC
GGCCTGCCCACGACCGAGATGCACGGCGACCAGCCACTGGAAGACTACCTTGATTCGATCGAGAAAGACGCCATCCTGCA
GGCCCTGGAACAAACCCGTTTCAACAAGACCGCGGCGGCTAAAAAACTCGGCATCACCTTCCGTGCCCTGCGTTACCGGC
TGAAGAAGCTCGGTCTGGAAGAATAG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (145-311)

• Response regulator receiver domain (Response_reg) (7-115)

• Bacterial regulatory protein, Fis family (HTH_8) (417-457)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	64.348	99.783	0.642
pilR	Acinetobacter baumannii strain A118	51.709	100	0.525
luxO	Vibrio cholerae strain A1552	37.389	98.048	0.367