Detailed information NTG0703200

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: NG812_RS05260
• Genome accession: NZ_CP099987
• Coordinates: 1070355..1071224 (-)
• Length: 289 a.a.
• NCBI ID: WP_270252823.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain FUA009
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1065355..1076224

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NG812_RS05245 (NG812_05215)	-	1066334..1066555 (+)	222	WP_074749946.1	hypothetical protein	-
NG812_RS05250 (NG812_05220)	trmFO	1066628..1067971 (-)	1344	WP_042217745.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
NG812_RS05255 (NG812_05225)	topA	1068016..1070166 (-)	2151	WP_023888984.1	type I DNA topoisomerase	-
NG812_RS05260 (NG812_05230)	dprA	1070355..1071224 (-)	870	WP_270252823.1	DNA-processing protein DprA	Machinery gene
NG812_RS05265 (NG812_05235)	budA	1071311..1072009 (-)	699	WP_270252824.1	acetolactate decarboxylase	-
NG812_RS05270 (NG812_05240)	-	1072151..1073875 (-)	1725	WP_004257235.1	ABC transporter permease/substrate binding protein	-
NG812_RS05275 (NG812_05245)	-	1073868..1075070 (-)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
NG812_RS05280 (NG812_05250)	-	1075276..1075896 (-)	621	WP_004257227.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32860.06 Da
• Isoelectric Point: 9.5559

>NTDB_id=703200 NG812_RS05260 WP_270252823.1 1070355..1071224(-) (dprA) [Lactococcus garvieae strain FUA009]
MIRNFEILRLKKAGVSNLGILKLIDYQEKHEAKLTLRQLARIAEVKAVPNFIESYKSQDVKRLREQYKTFPSFSILDDIY
PEWLKEMYNPPTLLFYQGNLKLLNFPKLGFVGSREMFKEAPKITYKLIEELKQSFVIVSGLARGVDTSSHVAAIKQQTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLVGEPPLKFHFPERNRIIAGLSRGIVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLITHGQDILDEFYLYEGNFLP

Nucleotide

• Length: 870 bp

>NTDB_id=703200 NG812_RS05260 WP_270252823.1 1070355..1071224(-) (dprA) [Lactococcus garvieae strain FUA009]
ATGATTAGAAATTTTGAAATATTGCGTTTGAAAAAAGCAGGAGTGTCGAATCTAGGGATTTTGAAACTGATTGACTATCA
AGAAAAGCATGAAGCAAAACTTACTTTACGACAGTTAGCGAGGATTGCAGAAGTCAAAGCTGTTCCTAATTTTATTGAGA
GTTACAAGAGTCAGGATGTGAAACGACTTCGAGAGCAATATAAGACCTTCCCTTCCTTTTCCATCTTAGACGACATTTAT
CCTGAATGGCTGAAAGAAATGTATAATCCCCCGACCCTCCTTTTTTATCAAGGAAATCTTAAGTTGCTTAACTTCCCTAA
ACTCGGATTTGTCGGGAGCCGTGAAATGTTTAAGGAAGCCCCTAAAATTACATACAAACTTATTGAGGAATTAAAACAAA
GCTTTGTTATAGTGAGCGGGTTAGCACGAGGTGTTGACACTTCTAGTCATGTAGCTGCTATAAAGCAACAAACACCAACC
ATTGCTGTCATTGGTAACGGTTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAGTATTTAGCAACTCATGA
ATTGGTTTTATCAGAATACCTTGTAGGAGAGCCGCCCCTTAAGTTTCATTTTCCAGAGAGAAATAGAATCATTGCGGGTC
TTTCTCGTGGAATTGTCGTTGTTGAAGCAAAGCAACGTAGCGGTAGCCTCATCACAAGTCGTTATGCCTTAGAGGGAAAT
AGAGAAGTCTTTGCTGTACCTGGAGATATTTTGAACAGAAATGCCTCTGGCTGTAATCAATTAATCCAGCAAGGTGCAGC
CAAGCTTATCACTCATGGTCAAGATATTTTGGATGAATTTTATTTATATGAAGGTAATTTCCTTCCTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.958	97.924	0.626
dprA	Streptococcus mutans UA159	55.197	96.54	0.533
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis SK321	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.047	96.54	0.512
dprA	Haemophilus influenzae Rd KW20	37.329	100	0.377