Detailed information NTG0696160

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: NDN13_RS12965
• Genome accession: NZ_CP098480
• Coordinates: 2710724..2711782 (-)
• Length: 352 a.a.
• NCBI ID: WP_004657415.1
• Uniprot ID: A0A1E7R2K5
• Organism: Acinetobacter sp. C32I
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2705724..2716782

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDN13_RS12940 (NDN13_12935)	aroK	2706039..2706596 (-)	558	WP_004657425.1	shikimate kinase AroK	-
NDN13_RS12945 (NDN13_12940)	pilQ	2706616..2708742 (-)	2127	WP_251118231.1	type IV pilus secretin PilQ family protein	Machinery gene
NDN13_RS12950 (NDN13_12945)	pilP	2708804..2709331 (-)	528	WP_251115743.1	pilus assembly protein PilP	Machinery gene
NDN13_RS12955 (NDN13_12950)	comO	2709334..2710077 (-)	744	WP_251115744.1	type 4a pilus biogenesis protein PilO	Machinery gene
NDN13_RS12960 (NDN13_12955)	pilN	2710074..2710724 (-)	651	WP_251115745.1	PilN domain-containing protein	Machinery gene
NDN13_RS12965 (NDN13_12960)	comM	2710724..2711782 (-)	1059	WP_004657415.1	pilus assembly protein PilM	Machinery gene
NDN13_RS12970 (NDN13_12965)	ponA	2711946..2714552 (+)	2607	WP_251115746.1	penicillin-binding protein PBP1a	-
NDN13_RS12975 (NDN13_12970)	-	2714568..2715386 (-)	819	WP_251115747.1	putative RNA methyltransferase	-
NDN13_RS12980 (NDN13_12975)	mraY	2715446..2716564 (-)	1119	WP_251115748.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39037.71 Da
• Isoelectric Point: 4.5488

>NTDB_id=696160 NDN13_RS12965 WP_004657415.1 2710724..2711782(-) (comM) [Acinetobacter sp. C32I]
MLRLYRKPNKGLVGVDISSTTVKLLELSVKNGRYWVESYAVMPLPESSVVEKSILNPEAVGDALERVVNLANPHTTNVAI
AVPTSMVINKIIEMDADMTDEEREVQIRMDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVDTRVEVLEL
AGLTAKIAEVESYAMERAFSVFADTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGRQLTQDVQSRYGLSFEE
AGRAKKERTLPDDYDTEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSSQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=696160 NDN13_RS12965 WP_004657415.1 2710724..2711782(-) (comM) [Acinetobacter sp. C32I]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAGTGGGTGTCGATATTAGTTCGACAACTGTTAAGTTATTGGAGCT
CTCTGTAAAGAACGGTAGATATTGGGTTGAAAGTTATGCGGTGATGCCATTGCCTGAAAGCAGTGTGGTGGAAAAAAGCA
TACTGAATCCAGAGGCGGTAGGTGATGCACTTGAGAGAGTCGTCAACCTTGCGAATCCTCACACCACCAATGTCGCGATT
GCAGTGCCAACATCGATGGTCATTAACAAGATCATTGAGATGGATGCTGACATGACGGATGAAGAGCGTGAAGTTCAAAT
CCGTATGGATGCTGAGCAATACATTCCGTTCCCATTAGATGAAGTAAGTCTTGATTTTGAAGTTTTACCTGATCGCCTAG
CGAATCCAAATCGGGTCAATGTCCTCTTGGTTGCAACACGCACCGAGAATGTCGATACACGTGTTGAAGTCTTGGAACTG
GCGGGCTTAACAGCAAAAATTGCTGAAGTTGAAAGTTATGCCATGGAGCGTGCATTCAGTGTATTTGCTGATACGCTGCC
AATGGGTGCAAATACGGTGGGGATCTTAGATATTGGCCATACCATGACCACCCTTTCGGTGATGCAAAAAGGCAAGATCA
TCTATACGCGTGAGCAAGTGTTTGGCGGTCGTCAACTGACTCAAGATGTACAGAGTCGCTATGGACTATCATTTGAAGAA
GCGGGTCGTGCGAAGAAAGAACGCACCTTGCCAGATGATTACGATACCGAAGTGCTTGAACCCTTCTTGGATGCAGTGGT
TCAACAAGCAGCACGTTCACTGCAATTCTTCTTTTCGTCTTCTCAATTTAATGAAATTGATCATATTTTGCTGGCGGGCG
GGAATGCCAATATTCCAGGTCTAGCCAAGTTATTACAACAAAAGCTCGGTTATCGGGTCACCATTGCCAATCCATTCCTA
CAAATGGGTTTTTCTTCTCAAATTGATATTAAAAAAATTGAAAACGATGCTTCCTCTTTGATGGTGGCATGTGGTTTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A1E7R2K5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	87.784	100	0.878
pilM	Acinetobacter baumannii D1279779	87.5	100	0.875
comM	Acinetobacter baylyi ADP1	82.386	100	0.824
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423