Detailed information NTG0696054

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: NDN11_RS01410
• Genome accession: NZ_CP098478
• Coordinates: 298662..299720 (+)
• Length: 352 a.a.
• NCBI ID: WP_004803903.1
• Uniprot ID: N9SPD6
• Organism: Acinetobacter sp. C26M
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 293662..304720

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDN11_RS01395 (NDN11_01395)	mraY	293887..295005 (+)	1119	WP_251110564.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
NDN11_RS01400 (NDN11_01400)	-	295065..295883 (+)	819	WP_251110565.1	putative RNA methyltransferase	-
NDN11_RS01405 (NDN11_01405)	ponA	295899..298499 (-)	2601	WP_251110566.1	penicillin-binding protein PBP1a	-
NDN11_RS01410 (NDN11_01410)	comM	298662..299720 (+)	1059	WP_004803903.1	pilus assembly protein PilM	Machinery gene
NDN11_RS01415 (NDN11_01415)	pilN	299720..300370 (+)	651	WP_251110567.1	PilN domain-containing protein	Machinery gene
NDN11_RS01420 (NDN11_01420)	comO	300367..301101 (+)	735	WP_251110568.1	type 4a pilus biogenesis protein PilO	Machinery gene
NDN11_RS01425 (NDN11_01425)	pilP	301104..301631 (+)	528	WP_167248608.1	pilus assembly protein PilP	Machinery gene
NDN11_RS01430 (NDN11_01430)	pilQ	301693..303828 (+)	2136	WP_251111463.1	type IV pilus secretin PilQ family protein	Machinery gene
NDN11_RS01435 (NDN11_01435)	aroK	303848..304408 (+)	561	WP_251110569.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39079.81 Da
• Isoelectric Point: 4.5488

>NTDB_id=696054 NDN11_RS01410 WP_004803903.1 298662..299720(+) (comM) [Acinetobacter sp. C26M]
MLRLYRKPNKGLTGVDISSTTVKLLELSVKNGRYWVESYAVMPLPESSVVEKSILNPEAVGDALERVVNLANPHTMNVAI
AVPTSMVINKIIEMDADMTDEEREVQIRMDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVDTRVEVLEL
AGLTAKIAEVESYAMERAFSVFADTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGRQLTQDVQSRYGLSFEE
AGRAKKERTLPDDYDTEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=696054 NDN11_RS01410 WP_004803903.1 298662..299720(+) (comM) [Acinetobacter sp. C26M]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAACGGGTGTCGATATTAGTTCGACAACTGTTAAATTATTGGAGCT
CTCTGTAAAGAACGGTAGATATTGGGTTGAAAGTTATGCAGTGATGCCATTGCCTGAGAGCAGTGTGGTCGAAAAAAGCA
TACTGAATCCAGAGGCGGTAGGGGATGCACTTGAGAGAGTGGTAAACCTTGCGAACCCTCACACCATGAATGTTGCGATT
GCAGTGCCGACATCGATGGTCATTAATAAGATCATCGAGATGGATGCTGACATGACGGATGAAGAACGAGAAGTTCAAAT
TCGTATGGATGCTGAGCAATACATTCCGTTCCCATTAGATGAAGTGAGCCTAGATTTTGAGGTTTTACCTGATCGTTTGG
CCAATCCAAACCGGGTAAATGTGCTCTTGGTTGCAACGCGCACCGAGAATGTAGACACGCGCGTAGAAGTGCTTGAACTA
GCGGGTTTAACTGCAAAAATTGCAGAAGTTGAAAGCTATGCAATGGAACGTGCCTTCAGTGTGTTTGCAGATACATTACC
GATGGGCGCAAACACGGTAGGTATTTTAGATATTGGTCATACTATGACCACGTTATCTGTAATGCAAAAAGGCAAGATCA
TCTATACACGTGAGCAAGTGTTTGGTGGCCGCCAGCTAACCCAAGATGTTCAGAGTCGCTATGGTCTTTCTTTTGAAGAA
GCTGGACGTGCCAAAAAAGAAAGAACCTTACCAGATGATTATGACACAGAGGTCCTTGAACCCTTCTTGGATGCCGTCGT
ACAACAAGCTGCGCGGTCACTTCAATTTTTCTTTTCATCTTCCCAATTCAATGAAATAGATCATATTTTACTTGCTGGAG
GGAATGCCAATATTCCAGGCCTAGCTAAGCTATTACAACAAAAACTCGGTTATCGCGTCACTATTGCCAATCCATTCCTA
CAAATGGGTTTTTCTCCCCAAATTGATATTAAAAAAATTGAAAACGATGCTTCCTCTTTGATGGTTGCATGTGGTTTGGC
ATTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9SPD6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	87.784	100	0.878
pilM	Acinetobacter baumannii D1279779	87.5	100	0.875
comM	Acinetobacter baylyi ADP1	82.386	100	0.824
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423